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GENE CARD

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Gene Card

Best human hits

KDM2A; KDM2B; PHF8

Species

C.savignyi

Unique Gene ID

Cisavi.g00004738

Gene Model ID

Cisavi.CG.ENS81.R23.1441803-1444816

Location

R23:1441802..1444816

Transcript Models and Sequences

  Cisavi.CG.ENS81.R23.1441803-1444816.00442.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Znf_CXXC Pfam Zinc finger, CXXC-type
JmjC_dom SMART JmjC domain
JmjC_dom ProSiteProfiles JmjC domain
Znf_CXXC ProSiteProfiles Zinc finger, CXXC-type
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
F-box_dom Pfam F-box domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 417 3.46e-128
DNA binding Hs molecular function 491 1.20e-157
chromatin binding Hs molecular function 278 1.98e-79
RNA binding Hs molecular function 417 3.46e-128
iron ion binding Hs molecular function 278 1.98e-79
protein binding Hs molecular function 491 1.20e-157
nucleus Hs cellular component 491 1.20e-157
nucleoplasm Hs cellular component 491 1.20e-157
nucleolus Hs cellular component 417 3.46e-128
methyltransferase activity Hs molecular function 491 1.20e-157
zinc ion binding Hs molecular function 491 1.20e-157
oxidoreductase activity Hs molecular function 491 1.20e-157
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Hs molecular function 278 1.98e-79
rRNA binding Hs molecular function 417 3.46e-128
PcG protein complex Hs cellular component 417 3.46e-128
nuclear membrane Hs cellular component 278 1.98e-79
histone demethylase activity Hs molecular function 491 1.20e-157
histone demethylase activity (H3-K9 specific) Hs molecular function 278 1.98e-79
methylated histone binding Hs molecular function 278 1.98e-79
histone demethylase activity (H4-K20 specific) Hs molecular function 278 1.98e-79
metal ion binding Hs molecular function 491 1.20e-157
dioxygenase activity Hs molecular function 491 1.20e-157
histone demethylase activity (H3-K36 specific) Hs molecular function 491 1.20e-157
histone demethylase activity (H3-K27 specific) Hs molecular function 278 1.98e-79

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding Pfam molecular function 4.5E-13
protein binding Pfam molecular function 3.6E-9
zinc ion binding Pfam molecular function 4.5E-13