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GENE CARD

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Gene Card

Best human hits

MED12; MED12L

Species

C.savignyi

Unique Gene ID

Cisavi.g00004958

Gene Model ID

Cisavi.CG.ENS81.R24.242883-271789

Location

R24:242882..271789

Transcript Models and Sequences

  Cisavi.CG.ENS81.R24.242883-271789.08109.t
Cisavi.CG.ENS81.R24.242883-271789.08110.t
Cisavi.CG.ENS81.R24.242883-271789.08111.t
Cisavi.CG.ENS81.R24.242883-271789.08112.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Mediator_Med12 SMART Mediator complex, subunit Med12
Mediator_Med12_LCEWAV Pfam Mediator complex, subunit Med12, LCEWAV-domain
Mediator_Med12 Pfam Mediator complex, subunit Med12

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

49 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ubiquitin ligase complex Hs cellular component
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription cofactor activity Hs molecular function
RNA polymerase II transcription coactivator activity Hs molecular function
transcriptional activator activity, RNA polymerase II transcription factor binding Hs molecular function
somitogenesis Hs biological process
neural tube closure Hs biological process
chromatin binding Hs molecular function
transcription cofactor activity Hs molecular function
transcription coactivator activity Hs molecular function
receptor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
endoderm development Hs biological process
heart development Hs biological process
beta-catenin binding Hs molecular function
protein C-terminus binding Hs molecular function
transcription factor binding Hs molecular function
oligodendrocyte development Hs biological process
Schwann cell development Hs biological process
membrane Hs cellular component
protein ubiquitination Hs biological process
mediator complex Hs cellular component
stem cell population maintenance Hs biological process
protein domain specific binding Hs molecular function
spinal cord development Hs biological process
neural tube development Hs biological process
negative regulation of Wnt signaling pathway Hs biological process
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function
intracellular steroid hormone receptor signaling pathway Hs biological process
androgen receptor signaling pathway Hs biological process
post-anal tail morphogenesis Hs biological process
vitamin D receptor binding Hs molecular function
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
thyroid hormone receptor binding Hs molecular function
embryonic organ development Hs biological process
embryonic neurocranium morphogenesis Hs biological process
canonical Wnt signaling pathway Hs biological process
Wnt signaling pathway, planar cell polarity pathway Hs biological process
ubiquitin protein ligase activity Hs molecular function
axis elongation involved in somitogenesis Hs biological process
embryonic brain development Hs biological process

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ubiquitin ligase complex Hs cellular component 1105 0.0
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 1105 0.0
RNA polymerase II transcription cofactor activity Hs molecular function 1194 0.0
RNA polymerase II transcription coactivator activity Hs molecular function 1194 0.0
transcriptional activator activity, RNA polymerase II transcription factor binding Hs molecular function 1105 0.0
chromatin binding Hs molecular function 1105 0.0
transcription cofactor activity Hs molecular function 1105 0.0
transcription coactivator activity Hs molecular function 1105 0.0
receptor activity Hs molecular function 1105 0.0
protein binding Hs molecular function 1105 0.0
nucleus Hs cellular component 1194 0.0
nucleoplasm Hs cellular component 1105 0.0
beta-catenin binding Hs molecular function 1194 0.0
protein C-terminus binding Hs molecular function 1105 0.0
transcription factor binding Hs molecular function 1105 0.0
membrane Hs cellular component 1105 0.0
mediator complex Hs cellular component 1194 0.0
protein domain specific binding Hs molecular function 1105 0.0
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function 1105 0.0
vitamin D receptor binding Hs molecular function 1105 0.0
thyroid hormone receptor binding Hs molecular function 1105 0.0
ubiquitin protein ligase activity Hs molecular function 1105 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
RNA polymerase II transcription cofactor activity SMART molecular function 6.5E-21
regulation of transcription from RNA polymerase II promoter SMART biological process 6.5E-21
mediator complex SMART cellular component 6.5E-21

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