Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

13 results

IPR Term	Analysis	Definition
GROEL-like_equatorial_sf	Gene3D	GroEL-like equatorial domain superfamily
GroEL-like_apical_dom_sf	Gene3D	GroEL-like apical domain superfamily
GROEL-like_equatorial_sf	SUPERFAMILY	GroEL-like equatorial domain superfamily
Cpn60/TCP-1	Pfam	Chaperonin Cpn60/TCP-1 family
GroEL-like_apical_dom_sf	SUPERFAMILY	GroEL-like apical domain superfamily
Chaprnin_Cpn60	CDD	Chaperonin Cpn60
Chaperonin_Cpn60_CS	ProSitePatterns	Chaperonin Cpn60, conserved site
Chaprnin_Cpn60	Hamap	Chaperonin Cpn60
TCP-1-like_intermed_sf	SUPERFAMILY	TCP-1-like chaperonin intermediate domain superfamily
Chaprnin_Cpn60	PRINTS	Chaperonin Cpn60
Chaprnin_Cpn60	TIGRFAM	Chaperonin Cpn60
TCP-1-like_intermed_sf	Gene3D	TCP-1-like chaperonin intermediate domain superfamily
Cpn60/TCP-1	PANTHER	Chaperonin Cpn60/TCP-1 family

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

57 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
lipopolysaccharide binding	Hs	molecular function
p53 binding	Hs	molecular function
MyD88-dependent toll-like receptor signaling pathway	Hs	biological process
DNA replication origin binding	Hs	molecular function
single-stranded DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
double-stranded RNA binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
extracellular space	Hs	cellular component
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial matrix	Hs	cellular component
early endosome	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
clathrin-coated pit	Hs	cellular component
regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein folding	Hs	biological process
'de novo' protein folding	Hs	biological process
activation of cysteine-type endopeptidase activity involved in apoptotic process	Hs	biological process
response to unfolded protein	Hs	biological process
high-density lipoprotein particle binding	Hs	molecular function
apoptotic mitochondrial changes	Hs	biological process
response to cold	Hs	biological process
cell surface	Hs	cellular component
membrane	Hs	cellular component
viral process	Hs	biological process
hydrolase activity	Hs	molecular function
ATPase activity	Hs	molecular function
enzyme binding	Hs	molecular function
cyclin-dependent protein kinase activating kinase holoenzyme complex	Hs	cellular component
coated vesicle	Hs	cellular component
secretory granule	Hs	cellular component
ubiquitin protein ligase binding	Hs	molecular function
macromolecular complex	Hs	cellular component
apolipoprotein binding	Hs	molecular function
apolipoprotein A-I binding	Hs	molecular function
protein refolding	Hs	biological process
B cell proliferation	Hs	biological process
T cell activation	Hs	biological process
B cell activation	Hs	biological process
positive regulation of apoptotic process	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
protein binding involved in protein folding	Hs	molecular function
protein import into mitochondrial intermembrane space	Hs	biological process
lipopolysaccharide receptor complex	Hs	cellular component
protein stabilization	Hs	biological process
positive regulation of T cell activation	Hs	biological process
unfolded protein binding	Hs	molecular function
chaperone binding	Hs	molecular function
chaperone-mediated protein complex assembly	Hs	biological process
protein maturation	Hs	biological process
chaperone-mediated protein folding	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

52 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	777	0.0
lipopolysaccharide binding	Hs	molecular function	777	0.0
p53 binding	Hs	molecular function	777	0.0
zona pellucida receptor complex	Hs	cellular component	76.6	1.17e-14
DNA replication origin binding	Hs	molecular function	777	0.0
single-stranded DNA binding	Hs	molecular function	777	0.0
RNA binding	Hs	molecular function	777	0.0
double-stranded RNA binding	Hs	molecular function	777	0.0
mRNA 3'-UTR binding	Hs	molecular function	76.6	1.17e-14
protein binding	Hs	molecular function	777	0.0
ATP binding	Hs	molecular function	777	0.0
extracellular space	Hs	cellular component	777	0.0
nucleoplasm	Hs	cellular component	63.2	2.33e-10
nucleolus	Hs	cellular component	76.6	1.17e-14
cytoplasm	Hs	cellular component	777	0.0
mitochondrion	Hs	cellular component	777	0.0
mitochondrial inner membrane	Hs	cellular component	777	0.0
mitochondrial matrix	Hs	cellular component	777	0.0
early endosome	Hs	cellular component	777	0.0
centrosome	Hs	cellular component	76.6	1.17e-14
microtubule organizing center	Hs	cellular component	76.6	1.17e-14
cytosol	Hs	cellular component	777	0.0
chaperonin-containing T-complex	Hs	cellular component	76.6	1.17e-14
cytoskeleton	Hs	cellular component	76.6	1.17e-14
microtubule	Hs	cellular component	76.6	1.17e-14
plasma membrane	Hs	cellular component	777	0.0
clathrin-coated pit	Hs	cellular component	777	0.0
high-density lipoprotein particle binding	Hs	molecular function	777	0.0
cell surface	Hs	cellular component	777	0.0
membrane	Hs	cellular component	777	0.0
hydrolase activity	Hs	molecular function	777	0.0
ATPase activity	Hs	molecular function	777	0.0
enzyme binding	Hs	molecular function	777	0.0
cyclin-dependent protein kinase activating kinase holoenzyme complex	Hs	cellular component	777	0.0
coated vesicle	Hs	cellular component	777	0.0
secretory granule	Hs	cellular component	777	0.0
ubiquitin protein ligase binding	Hs	molecular function	777	0.0
G-protein beta-subunit binding	Hs	molecular function	76.6	1.17e-14
macromolecular complex	Hs	cellular component	777	0.0
apolipoprotein binding	Hs	molecular function	777	0.0
apolipoprotein A-I binding	Hs	molecular function	777	0.0
melanosome	Hs	cellular component	63.2	2.33e-10
cell projection	Hs	cellular component	63.2	2.33e-10
myelin sheath	Hs	cellular component	76.6	1.17e-14
protein binding involved in protein folding	Hs	molecular function	777	0.0
cell body	Hs	cellular component	76.6	1.17e-14
lipopolysaccharide receptor complex	Hs	cellular component	777	0.0
mRNA 5'-UTR binding	Hs	molecular function	76.6	1.17e-14
beta-tubulin binding	Hs	molecular function	76.6	1.17e-14
unfolded protein binding	Hs	molecular function	777	0.0
chaperone binding	Hs	molecular function	777	0.0
extracellular exosome	Hs	cellular component	777	0.0

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
ATP binding	PANTHER	molecular function	3.0E-251
cytoplasm	CDD	cellular component	0.0
protein folding	ProSitePatterns	biological process
protein refolding	CDD	biological process	0.0

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)