Aniseed - Gene card

Gene Card

Best human hits

CUL1; CUL2; CUL3

Species

C.savignyi

Unique Gene ID

Cisavi.g00005125

Gene Model ID

Cisavi.CG.ENS81.R25.125952-142845

Location

R25:125951..142845

Transcript Models and Sequences

Cisavi.CG.ENS81.R25.125952-142845.10808.t
Cisavi.CG.ENS81.R25.125952-142845.10809.t
Cisavi.CG.ENS81.R25.125952-142845.10810.t
Cisavi.CG.ENS81.R25.125952-142845.10811.t
Cisavi.CG.ENS81.R25.125952-142845.10812.t
Cisavi.CG.ENS81.R25.125952-142845.10813.t
Cisavi.CG.ENS81.R25.125952-142845.10814.t
Cisavi.CG.ENS81.R25.125952-142845.10815.t
Cisavi.CG.ENS81.R25.125952-142845.10816.t
Cisavi.CG.ENS81.R25.125952-142845.10817.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Cullin_homology	ProSiteProfiles	Cullin homology domain
Cullin_CS	ProSitePatterns	Cullin, conserved site
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily
Cullin_N	Pfam	Cullin, N-terminal
Cullin_homology	SMART	Cullin homology domain
Cullin_neddylation_domain	SMART	Cullin protein, neddylation domain
Cullin_repeat-like_dom_sf	SUPERFAMILY	Cullin repeat-like-containing domain superfamily
Cullin_neddylation_domain	Pfam	Cullin protein, neddylation domain
Cullin_homology_sf	SUPERFAMILY	Cullin homology domain superfamily
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

34 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G1/S transition of mitotic cell cycle	Hs	biological process
G2/M transition of mitotic cell cycle	Hs	biological process
protein polyubiquitination	Hs	biological process
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleoplasm	Hs	cellular component
cytosol	Hs	cellular component
ubiquitin-dependent protein catabolic process	Hs	biological process
protein monoubiquitination	Hs	biological process
cellular iron ion homeostasis	Hs	biological process
apoptotic process	Hs	biological process
cell cycle arrest	Hs	biological process
cell proliferation	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
animal organ morphogenesis	Hs	biological process
SCF complex assembly	Hs	biological process
negative regulation of G2/M transition of mitotic cell cycle	Hs	biological process
viral process	Hs	biological process
Wnt signaling pathway	Hs	biological process
protein ubiquitination	Hs	biological process
SCF ubiquitin ligase complex	Hs	cellular component
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Hs	biological process
cullin-RING ubiquitin ligase complex	Hs	cellular component
ubiquitin protein ligase binding	Hs	molecular function
NIK/NF-kappaB signaling	Hs	biological process
Fc-epsilon receptor signaling pathway	Hs	biological process
proteasome-mediated ubiquitin-dependent protein catabolic process	Hs	biological process
post-translational protein modification	Hs	biological process
T cell receptor signaling pathway	Hs	biological process
stress-activated MAPK cascade	Hs	biological process
ubiquitin protein ligase activity	Hs	molecular function
interleukin-1-mediated signaling pathway	Hs	biological process
intrinsic apoptotic signaling pathway	Hs	biological process
Parkin-FBXW7-Cul1 ubiquitin ligase complex	Hs	cellular component

GO (Blast)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	337	2.56e-104
ubiquitin-protein transferase activity	Hs	molecular function	1163	0.0
Notch binding	Hs	molecular function	337	2.56e-104
protein binding	Hs	molecular function	1163	0.0
nucleus	Hs	cellular component	337	2.56e-104
nucleoplasm	Hs	cellular component	1163	0.0
nucleolus	Hs	cellular component	450	1.82e-147
cytoplasm	Hs	cellular component	337	2.56e-104
Golgi apparatus	Hs	cellular component	337	2.56e-104
polar microtubule	Hs	cellular component	337	2.56e-104
cytosol	Hs	cellular component	1163	0.0
membrane	Hs	cellular component	337	2.56e-104
SCF ubiquitin ligase complex	Hs	cellular component	1163	0.0
cyclin binding	Hs	molecular function	337	2.56e-104
VCB complex	Hs	cellular component	450	1.82e-147
POZ domain binding	Hs	molecular function	337	2.56e-104
cullin-RING ubiquitin ligase complex	Hs	cellular component	1163	0.0
Cul2-RING ubiquitin ligase complex	Hs	cellular component	450	1.82e-147
Cul3-RING ubiquitin ligase complex	Hs	cellular component	337	2.56e-104
ubiquitin protein ligase binding	Hs	molecular function	1163	0.0
sperm flagellum	Hs	cellular component	337	2.56e-104
protein homodimerization activity	Hs	molecular function	337	2.56e-104
protein heterodimerization activity	Hs	molecular function	337	2.56e-104
ubiquitin protein ligase activity	Hs	molecular function	1163	0.0
extracellular exosome	Hs	cellular component	337	2.56e-104
Parkin-FBXW7-Cul1 ubiquitin ligase complex	Hs	cellular component	1163	0.0

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
ubiquitin-dependent protein catabolic process	Pfam	biological process	4.4E-194
cullin-RING ubiquitin ligase complex	ProSitePatterns	cellular component
ubiquitin protein ligase binding	Pfam	molecular function	4.4E-194