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GENE CARD

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Gene Card

Best human hits

NHLH1; TWIST1; TWIST2

Species

C.savignyi

Unique Gene ID

Cisavi.g00005136

Gene Model ID

Cisavi.CG.ENS81.R25.1433924-1436382

Location

R25:1433923..1436382

Transcript Models and Sequences

  Cisavi.CG.ENS81.R25.1433924-1436382.14902.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
bHLH_dom ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom Pfam Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom CDD Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf SUPERFAMILY Helix-loop-helix DNA-binding domain superfamily
Twist-related PANTHER Twist-related
bHLH_dom SMART Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf Gene3D Helix-loop-helix DNA-binding domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 41.6 9.05e-05
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 43.1 6.05e-05
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 41.6 9.05e-05
DNA binding Hs molecular function 43.1 6.05e-05
transcription factor activity, sequence-specific DNA binding Hs molecular function 43.1 6.05e-05
protein binding Hs molecular function 43.1 6.05e-05
nucleus Hs cellular component 43.1 6.05e-05
nucleoplasm Hs cellular component 43.1 6.05e-05
nucleolus Hs cellular component 41.2 1.58e-04
cytoplasm Hs cellular component 41.2 1.58e-04
transcription factor binding Hs molecular function 43.1 6.05e-05
protein domain specific binding Hs molecular function 43.1 6.05e-05
protein homodimerization activity Hs molecular function 43.1 6.05e-05
bHLH transcription factor binding Hs molecular function 43.1 6.05e-05
protein heterodimerization activity Hs molecular function 43.1 6.05e-05
protein dimerization activity Hs molecular function 43.1 6.05e-05
E-box binding Hs molecular function 43.1 6.05e-05

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein dimerization activity Gene3D molecular function 3.6E-13