Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

LIMD1; LPP; TRIP6

Species

C.savignyi

Unique Gene ID

Cisavi.g00005227

Gene Model ID

Cisavi.CG.ENS81.R25.2916913-2935440

Location

R25:2916912..2935440

Transcript Models and Sequences

  Cisavi.CG.ENS81.R25.2916913-2935440.17617.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_LIM ProSitePatterns Zinc finger, LIM-type
Znf_LIM Pfam Zinc finger, LIM-type
Znf_LIM SMART Zinc finger, LIM-type
Znf_LIM ProSiteProfiles Zinc finger, LIM-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 143 2.20e-37
transcription corepressor activity Hs molecular function 143 2.20e-37
RNA binding Hs molecular function 183 3.57e-53
interleukin-1 receptor binding Hs molecular function 183 3.57e-53
protein binding Hs molecular function 196 5.26e-57
nucleus Hs cellular component 196 5.26e-57
transcription factor complex Hs cellular component 143 2.20e-37
cytoplasm Hs cellular component 196 5.26e-57
cytosol Hs cellular component 196 5.26e-57
cytoskeleton Hs cellular component 183 3.57e-53
plasma membrane Hs cellular component 196 5.26e-57
cell-cell junction Hs cellular component 143 2.20e-37
adherens junction Hs cellular component 143 2.20e-37
focal adhesion Hs cellular component 196 5.26e-57
zinc ion binding Hs molecular function 143 2.20e-37
membrane Hs cellular component 196 5.26e-57
RISC complex Hs cellular component 143 2.20e-37
kinase binding Hs molecular function 183 3.57e-53
cell junction Hs cellular component 196 5.26e-57
interleukin-1 receptor complex Hs cellular component 183 3.57e-53
metal ion binding Hs molecular function 196 5.26e-57
thyroid hormone receptor binding Hs molecular function 183 3.57e-53

GO (InterProScan)

No result

GO Term Analysis Type e-value