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GENE CARD

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Gene Card

Best human hits

GPATCH3

Species

C.savignyi

Unique Gene ID

Cisavi.g00005474

Gene Model ID

Cisavi.CG.ENS81.R26.664426-665883

Location

R26:664425..665883

Transcript Models and Sequences

  Cisavi.CG.ENS81.R26.664426-665883.10193.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
G_patch_dom ProSiteProfiles G-patch domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
negative regulation of type I interferon production Hs biological process
positive regulation of transcription, DNA-templated Hs biological process

GO (Blast)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 302 1.01e-97
protein binding Hs molecular function 302 1.01e-97
nucleus Hs cellular component 302 1.01e-97
cytoplasm Hs cellular component 302 1.01e-97

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 1.65E-5