Aniseed - Gene card

Gene Card

Best human hits

COL7A1; PTPRF; PTPRJ

Species

C.savignyi

Unique Gene ID

Cisavi.g00005496

Gene Model ID

Cisavi.CG.ENS81.R26.889087-893590

Location

R26:889086..893590

Transcript Models and Sequences

Cisavi.CG.ENS81.R26.889087-893590.10904.t
Cisavi.CG.ENS81.R26.889087-893590.10905.t
Cisavi.CG.ENS81.R26.889087-893590.10906.t
Cisavi.CG.ENS81.R26.889087-893590.10907.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
FN3_dom	ProSiteProfiles	Fibronectin type III
Ig-like_fold	Gene3D	Immunoglobulin-like fold
FN3_dom	CDD	Fibronectin type III
FN3_dom	SMART	Fibronectin type III
FN3_sf	SUPERFAMILY	Fibronectin type III superfamily
FN3_dom	Pfam	Fibronectin type III

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

42 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	41.2	0.001
immunological synapse	Hs	cellular component	41.6	0.001
phosphoprotein phosphatase activity	Hs	molecular function	41.6	0.001
protein tyrosine phosphatase activity	Hs	molecular function	41.6	0.001
serine-type endopeptidase inhibitor activity	Hs	molecular function	41.2	0.001
transmembrane receptor protein tyrosine phosphatase activity	Hs	molecular function	40.4	0.003
platelet-derived growth factor receptor binding	Hs	molecular function	41.6	0.001
protein binding	Hs	molecular function	41.6	0.001
extracellular region	Hs	cellular component	41.2	0.001
proteinaceous extracellular matrix	Hs	cellular component	41.2	0.001
collagen trimer	Hs	cellular component	41.2	0.001
collagen type VII trimer	Hs	cellular component	41.2	0.001
basement membrane	Hs	cellular component	41.2	0.001
extracellular space	Hs	cellular component	41.2	0.001
endoplasmic reticulum lumen	Hs	cellular component	41.2	0.001
plasma membrane	Hs	cellular component	41.6	0.001
integral component of plasma membrane	Hs	cellular component	41.6	0.001
cell-cell junction	Hs	cellular component	41.6	0.001
beta-catenin binding	Hs	molecular function	41.6	0.001
heparin binding	Hs	molecular function	40.4	0.003
cell surface	Hs	cellular component	41.6	0.001
membrane	Hs	cellular component	41.6	0.001
integral component of membrane	Hs	cellular component	41.6	0.001
hydrolase activity	Hs	molecular function	41.6	0.001
phosphatase activity	Hs	molecular function	41.6	0.001
protein kinase binding	Hs	molecular function	41.6	0.001
cell junction	Hs	cellular component	41.6	0.001
COPII-coated ER to Golgi transport vesicle	Hs	cellular component	41.2	0.001
peptidase inhibitor activity	Hs	molecular function	41.2	0.001
extracellular matrix	Hs	cellular component	41.2	0.001
ruffle membrane	Hs	cellular component	41.6	0.001
endoplasmic reticulum-Golgi intermediate compartment membrane	Hs	cellular component	41.2	0.001
chondroitin sulfate proteoglycan binding	Hs	molecular function	40.4	0.003
specific granule membrane	Hs	cellular component	41.6	0.001
identical protein binding	Hs	molecular function	41.6	0.001
cell projection	Hs	cellular component	41.6	0.001
neuron projection	Hs	cellular component	40.4	0.003
neuronal cell body	Hs	cellular component	40.4	0.003
gamma-catenin binding	Hs	molecular function	41.6	0.001
mitogen-activated protein kinase binding	Hs	molecular function	41.6	0.001
extracellular exosome	Hs	cellular component	41.6	0.001
delta-catenin binding	Hs	molecular function	41.6	0.001

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	5.17E-16