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GENE CARD

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Gene Card

Best human hits

SMG5; SMG6

Species

C.savignyi

Unique Gene ID

Cisavi.g00005988

Gene Model ID

Cisavi.CG.ENS81.R3.1532716-1538822

Location

R3:1532715..1538822

Transcript Models and Sequences

  Cisavi.CG.ENS81.R3.1532716-1538822.09551.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
PIN_dom Pfam PIN domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
ribonuclease activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
telomerase holoenzyme complex Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
mRNA export from nucleus Hs biological process
ubiquitin protein ligase binding Hs molecular function
regulation of telomere maintenance via telomerase Hs biological process
regulation of dephosphorylation Hs biological process
telomeric DNA binding Hs molecular function
histone deacetylase binding Hs molecular function
ribonucleoprotein complex binding Hs molecular function
regulation of RNA stability Hs biological process
protein phosphatase 2A binding Hs molecular function
telomerase RNA binding Hs molecular function
DNA polymerase binding Hs molecular function
RNA phosphodiester bond hydrolysis Hs biological process

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
telomerase catalytic core complex Hs cellular component 37.7 0.008
chromosome, telomeric region Hs cellular component 37.7 0.008
DNA binding Hs molecular function 37.7 0.008
RNA binding Hs molecular function 37.7 0.008
nuclease activity Hs molecular function 37.7 0.008
endonuclease activity Hs molecular function 37.7 0.008
endoribonuclease activity Hs molecular function 37.7 0.008
ribonuclease activity Hs molecular function 160 3.37e-44
protein binding Hs molecular function 160 3.37e-44
nucleus Hs cellular component 160 3.37e-44
chromosome Hs cellular component 37.7 0.008
telomerase holoenzyme complex Hs cellular component 160 3.37e-44
nucleolus Hs cellular component 37.7 0.008
cytoplasm Hs cellular component 160 3.37e-44
cytosol Hs cellular component 160 3.37e-44
hydrolase activity Hs molecular function 37.7 0.008
ubiquitin protein ligase binding Hs molecular function 160 3.37e-44
exon-exon junction complex Hs cellular component 37.7 0.008
telomeric DNA binding Hs molecular function 160 3.37e-44
histone deacetylase binding Hs molecular function 160 3.37e-44
ribonucleoprotein complex binding Hs molecular function 160 3.37e-44
metal ion binding Hs molecular function 37.7 0.008
protein phosphatase 2A binding Hs molecular function 160 3.37e-44
telomerase RNA binding Hs molecular function 160 3.37e-44
DNA polymerase binding Hs molecular function 160 3.37e-44

GO (InterProScan)

No result

GO Term Analysis Type e-value