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GENE CARD

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Gene Card

Best human hits

GAPVD1; RABGEF1; RIN3

Species

C.savignyi

Unique Gene ID

Cisavi.g00005994

Gene Model ID

Cisavi.CG.ENS81.R3.1625858-1632256

Location

R3:1625857..1632256

Transcript Models and Sequences

  Cisavi.CG.ENS81.R3.1625858-1632256.11345.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
VPS9 Pfam VPS9 domain
VPS9 SMART VPS9 domain
VPS9_dom_sf SUPERFAMILY VPS9 domain superfamily
VPS9 ProSiteProfiles VPS9 domain
VPS9_dom_sf Gene3D VPS9 domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 328 8.86e-107
guanyl-nucleotide exchange factor activity Hs molecular function 80.9 9.50e-16
GTPase activator activity Hs molecular function 80.9 9.50e-16
protein binding Hs molecular function 328 8.86e-107
nucleolus Hs cellular component 328 8.86e-107
cytoplasm Hs cellular component 328 8.86e-107
endosome Hs cellular component 328 8.86e-107
early endosome Hs cellular component 328 8.86e-107
cytosol Hs cellular component 328 8.86e-107
zinc ion binding Hs molecular function 328 8.86e-107
membrane Hs cellular component 80.9 9.50e-16
Rab guanyl-nucleotide exchange factor activity Hs molecular function 328 8.86e-107
Rab GTPase binding Hs molecular function 328 8.86e-107
cytoplasmic vesicle Hs cellular component 48.1 1.19e-05
early endosome membrane Hs cellular component 328 8.86e-107
GTPase activating protein binding Hs molecular function 80.9 9.50e-16
cadherin binding Hs molecular function 80.9 9.50e-16
metal ion binding Hs molecular function 328 8.86e-107
recycling endosome Hs cellular component 328 8.86e-107

GO (InterProScan)

No result

GO Term Analysis Type e-value