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GENE CARD

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Gene Card

Best human hits

COL12A1; COL14A1; VWA2

Species

C.savignyi

Unique Gene ID

Cisavi.g00006215

Gene Model ID

Cisavi.CG.ENS81.R30.1858353-1867139

Location

R30:1858352..1867139

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
VWF_A Pfam von Willebrand factor, type A
VWF_A ProSiteProfiles von Willebrand factor, type A
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
VWF_A SMART von Willebrand factor, type A
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 74.3 1.20e-15
extracellular matrix structural constituent Hs molecular function 74.3 1.20e-15
calcium ion binding Hs molecular function 73.9 1.42e-15
protein binding Hs molecular function 81.6 3.30e-18
collagen binding Hs molecular function 74.3 1.20e-15
extracellular region Hs cellular component 81.6 3.30e-18
proteinaceous extracellular matrix Hs cellular component 81.6 3.30e-18
collagen trimer Hs cellular component 81.6 3.30e-18
collagen type XII trimer Hs cellular component 81.6 3.30e-18
collagen type XIV trimer Hs cellular component 74.3 1.20e-15
basement membrane Hs cellular component 73.9 1.42e-15
extracellular space Hs cellular component 81.6 3.30e-18
endoplasmic reticulum lumen Hs cellular component 81.6 3.30e-18
extracellular matrix structural constituent conferring tensile strength Hs molecular function 81.6 3.30e-18
protein binding, bridging Hs molecular function 74.3 1.20e-15
extracellular matrix Hs cellular component 81.6 3.30e-18
identical protein binding Hs molecular function 73.9 1.42e-15
extracellular exosome Hs cellular component 81.6 3.30e-18
extracellular vesicle Hs cellular component 81.6 3.30e-18

GO (InterProScan)

No result

GO Term Analysis Type e-value