Aniseed - Gene card

Gene Card

Best human hits

ABCC1; ABCC4

Species

C.savignyi

Unique Gene ID

Cisavi.g00006589

Gene Model ID

Cisavi.CG.ENS81.R312.642252-662448

Location

R312:642251..662448

Transcript Models and Sequences

Cisavi.CG.ENS81.R312.642252-662448.02255.t
Cisavi.CG.ENS81.R312.642252-662448.02256.t
Cisavi.CG.ENS81.R312.642252-662448.02257.t
Cisavi.CG.ENS81.R312.642252-662448.02258.t
Cisavi.CG.ENS81.R312.642252-662448.02259.t
Cisavi.CG.ENS81.R312.642252-662448.02260.t
Cisavi.CG.ENS81.R312.642252-662448.02261.t
Cisavi.CG.ENS81.R312.642252-662448.02262.t
Cisavi.CG.ENS81.R312.642252-662448.02263.t
Cisavi.CG.ENS81.R312.642252-662448.02264.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
AAA+_ATPase	SMART	AAA+ ATPase domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
ABC1_TM_sf	SUPERFAMILY	ABC transporter type 1, transmembrane domain superfamily
ABC1_TM_sf	Gene3D	ABC transporter type 1, transmembrane domain superfamily
ABC_transporter-like	ProSiteProfiles	ABC transporter-like
ABC_transporter_CS	ProSitePatterns	ABC transporter, conserved site
ABC_transporter-like	Pfam	ABC transporter-like
ABC1_TM_dom	ProSiteProfiles	ABC transporter type 1, transmembrane domain
ABC1_TM_dom	Pfam	ABC transporter type 1, transmembrane domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
ATP binding	Hs	molecular function
plasma membrane	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
ATPase activity	Hs	molecular function
ATPase activity, coupled to transmembrane movement of substances	Hs	molecular function
ATPase-coupled anion transmembrane transporter activity	Hs	molecular function
transmembrane transport	Hs	biological process
lysosomal membrane	Hs	cellular component

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	577	0.0
phospholipid-translocating ATPase activity	Hs	molecular function	436	2.93e-130
transporter activity	Hs	molecular function	436	2.93e-130
ATP binding	Hs	molecular function	577	0.0
plasma membrane	Hs	cellular component	577	0.0
integral component of plasma membrane	Hs	cellular component	577	0.0
xenobiotic-transporting ATPase activity	Hs	molecular function	436	2.93e-130
cobalamin-transporting ATPase activity	Hs	molecular function	436	2.93e-130
glutathione S-conjugate-exporting ATPase activity	Hs	molecular function	436	2.93e-130
ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	Hs	molecular function	577	0.0
membrane	Hs	cellular component	577	0.0
integral component of membrane	Hs	cellular component	577	0.0
basolateral plasma membrane	Hs	cellular component	577	0.0
15-hydroxyprostaglandin dehydrogenase (NAD+) activity	Hs	molecular function	577	0.0
hydrolase activity	Hs	molecular function	436	2.93e-130
ATPase activity	Hs	molecular function	577	0.0
transmembrane transporter activity	Hs	molecular function	436	2.93e-130
platelet dense granule membrane	Hs	cellular component	577	0.0
glutathione transmembrane transporter activity	Hs	molecular function	436	2.93e-130
ATPase activity, coupled to transmembrane movement of substances	Hs	molecular function	577	0.0
ATPase-coupled anion transmembrane transporter activity	Hs	molecular function	577	0.0
sphingolipid-translocating ATPase activity	Hs	molecular function	436	2.93e-130
extracellular exosome	Hs	cellular component	436	2.93e-130

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
ATP binding	SUPERFAMILY	molecular function	2.75E-59
integral component of membrane	SUPERFAMILY	cellular component	2.75E-59
ATPase activity	Pfam	molecular function	1.1E-28
ATPase activity, coupled to transmembrane movement of substances	Pfam	molecular function	1.3E-45
transmembrane transport	Pfam	biological process	1.3E-45