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GENE CARD

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Gene Card

Best human hits

HERC1; HERC2

Species

C.savignyi

Unique Gene ID

Cisavi.g00006675

Gene Model ID

Cisavi.CG.ENS81.R335.67472-128609

Location

R335:67471..128609

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

26 results

IPR Term Analysis Definition
Reg_chr_condens ProSiteProfiles Regulator of chromosome condensation, RCC1
Reg_chr_condens ProSitePatterns Regulator of chromosome condensation, RCC1
HECT_dom Pfam HECT domain
HECT_dom ProSiteProfiles HECT domain
Hect_E3_ubiquitin_ligase SUPERFAMILY HECT, E3 ligase catalytic domain
HECT_dom CDD HECT domain
HECT_dom SMART HECT domain
Reg_chr_condens Pfam Regulator of chromosome condensation, RCC1
RCC1/BLIP-II Gene3D Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Reg_chr_condens PRINTS Regulator of chromosome condensation, RCC1
RCC1/BLIP-II SUPERFAMILY Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Mib_Herc2_sf SUPERFAMILY Mib/herc2 domain superfamily
Znf_ZZ ProSiteProfiles Zinc finger, ZZ-type
Znf_ZZ Pfam Zinc finger, ZZ-type
APC_su10/DOC_dom Pfam APC10/DOC domain
APC_su10/DOC_dom ProSiteProfiles APC10/DOC domain
Beta-propeller_rpt_TECPR SMART Beta-propeller repeat TECPR
APC_su10/DOC_dom SMART APC10/DOC domain
Rib_L2_dom2 Gene3D Ribosomal protein L2, domain 2
Znf_ZZ SMART Zinc finger, ZZ-type
Galactose-bd-like_sf SUPERFAMILY Galactose-binding-like domain superfamily
Mib_Herc2 ProSiteProfiles Mib-herc2
CPH_domain Pfam CPH domain
Galactose-bd-like_sf Gene3D Galactose-binding-like domain superfamily
Mib_Herc2 Pfam Mib-herc2
Mib_Herc2_sf Gene3D Mib/herc2 domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ubiquitin-protein transferase activity Hs molecular function
guanyl-nucleotide exchange factor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
mitochondrial inner membrane Hs cellular component
centriole Hs cellular component
cytoskeleton Hs cellular component
DNA repair Hs biological process
double-strand break repair via nonhomologous end joining Hs biological process
intracellular protein transport Hs biological process
cellular response to DNA damage stimulus Hs biological process
spermatogenesis Hs biological process
zinc ion binding Hs molecular function
membrane Hs cellular component
protein ubiquitination Hs biological process
transferase activity Hs molecular function
ubiquitin protein ligase binding Hs molecular function
SUMO binding Hs molecular function
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
metal ion binding Hs molecular function
ubiquitin protein ligase activity Hs molecular function
regulation of molecular function Hs biological process

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin-protein transferase activity Hs molecular function 3373 0.0
guanyl-nucleotide exchange factor activity Hs molecular function 3373 0.0
ARF guanyl-nucleotide exchange factor activity Hs molecular function 656 0.0
protein binding Hs molecular function 3373 0.0
nucleus Hs cellular component 3373 0.0
nucleoplasm Hs cellular component 3373 0.0
cytoplasm Hs cellular component 3373 0.0
mitochondrial inner membrane Hs cellular component 3373 0.0
Golgi apparatus Hs cellular component 656 0.0
centriole Hs cellular component 3373 0.0
cytosol Hs cellular component 656 0.0
cytoskeleton Hs cellular component 3373 0.0
zinc ion binding Hs molecular function 3373 0.0
membrane Hs cellular component 3373 0.0
transferase activity Hs molecular function 3373 0.0
ubiquitin protein ligase binding Hs molecular function 3373 0.0
SUMO binding Hs molecular function 3373 0.0
metal ion binding Hs molecular function 3373 0.0
ubiquitin protein ligase activity Hs molecular function 3373 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
ubiquitin-protein transferase activity CDD molecular function 3.23993E-102
zinc ion binding SMART molecular function 1.1E-7
protein ubiquitination Pfam biological process 4.4E-18
metal ion binding Gene3D molecular function 9.7E-24