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Gene Card

Best human hits

ACTA1; ACTA2; ACTC1

Species

C.savignyi

Unique Gene ID

Cisavi.g00006724

Gene Model ID

Cisavi.CG.ENS81.R347.25866-52542

Location

R347:25865..52542

Transcript Models and Sequences

  Cisavi.CG.ENS81.R347.25866-52542.06873.t
Cisavi.CG.ENS81.R347.25866-52542.06874.t
Cisavi.CG.ENS81.R347.25866-52542.06875.t
Cisavi.CG.ENS81.R347.25866-52542.06876.t
Cisavi.CG.ENS81.R347.25866-52542.06877.t
Cisavi.CG.ENS81.R347.25866-52542.06878.t
Cisavi.CG.ENS81.R347.25866-52542.06879.t
Cisavi.CG.ENS81.R347.25866-52542.06880.t
Cisavi.CG.ENS81.R347.25866-52542.06881.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term Analysis Definition
Proteasome_alpha-type ProSiteProfiles Proteasome alpha-type subunit
Proteasome_asu_N ProSitePatterns Proteasome alpha-subunit, N-terminal domain
Ntn_hydrolases_N Gene3D Nucleophile aminohydrolases, N-terminal
Proteasome_subunit_alpha2 PANTHER Proteasome subunit alpha2
Proteasome_sua/b Pfam Proteasome, subunit alpha/beta
Ntn_hydrolases_N SUPERFAMILY Nucleophile aminohydrolases, N-terminal
Proteasome_asu_N SMART Proteasome alpha-subunit, N-terminal domain
Proteasome_asu_N Pfam Proteasome alpha-subunit, N-terminal domain
Actin SMART Actin family
Actin_CS ProSitePatterns Actin, conserved site
Actin PANTHER Actin family
Actin/actin-like_CS ProSitePatterns Actin/actin-like conserved site
Actin Pfam Actin family
Actin PRINTS Actin family

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 766 0.0
stress fiber Hs cellular component 766 0.0
structural constituent of cytoskeleton Hs molecular function 766 0.0
protein binding Hs molecular function 766 0.0
ATP binding Hs molecular function 766 0.0
extracellular space Hs cellular component 766 0.0
cytoplasm Hs cellular component 766 0.0
cytosol Hs cellular component 766 0.0
cytoskeleton Hs cellular component 766 0.0
striated muscle thin filament Hs cellular component 766 0.0
actin filament Hs cellular component 766 0.0
focal adhesion Hs cellular component 766 0.0
actin cytoskeleton Hs cellular component 766 0.0
membrane Hs cellular component 766 0.0
ATPase activity Hs molecular function 766 0.0
myosin binding Hs molecular function 766 0.0
protein kinase binding Hs molecular function 766 0.0
sarcomere Hs cellular component 766 0.0
lamellipodium Hs cellular component 766 0.0
filopodium Hs cellular component 766 0.0
smooth muscle contractile fiber Hs cellular component 766 0.0
I band Hs cellular component 766 0.0
macromolecular complex Hs cellular component 766 0.0
actomyosin, actin portion Hs cellular component 766 0.0
ADP binding Hs molecular function 766 0.0
cell body Hs cellular component 766 0.0
extracellular exosome Hs cellular component 766 0.0
blood microparticle Hs cellular component 766 0.0

GO (InterProScan)

6 results

GO Term Analysis Type e-value
endopeptidase activity Pfam molecular function 3.7E-10
ubiquitin-dependent protein catabolic process Pfam biological process 3.7E-10
proteasome core complex, alpha-subunit complex PANTHER cellular component 7.6E-119
threonine-type endopeptidase activity Pfam molecular function 2.9E-59
proteolysis involved in cellular protein catabolic process Pfam biological process 2.9E-59
proteasome core complex Pfam cellular component 2.9E-59

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