- Gene 'Cisavi.CG.ENS81.R37....'
Gene Card
Best human hits
NXF1; NXF2; NXF2B
Species
Unique Gene ID
Cisavi.g00006962
Gene Model ID
Cisavi.CG.ENS81.R37.2582356-2594081
Location
R37:2582355..2594081
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
15 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Tap_RNA-bd | ProDom | Nuclear RNA export factor Tap, RNA-binding domain |
| LRR_dom_sf | Gene3D | Leucine-rich repeat domain superfamily |
| NXF_fam | PANTHER | Nuclear RNA export factor |
| Tap_RNA-bd | Pfam | Nuclear RNA export factor Tap, RNA-binding domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| Leu-rich_rpt | ProSiteProfiles | Leucine-rich repeat |
| Nuclear_transport_factor_2_euk | ProSiteProfiles | Nuclear transport factor 2, eukaryote |
| TAP_C_dom | SMART | TAP C-terminal (TAP-C) domain |
| UBA-like_sf | SUPERFAMILY | UBA-like superfamily |
| TAP_C_dom | CDD | TAP C-terminal (TAP-C) domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| TAP_C_dom | Pfam | TAP C-terminal (TAP-C) domain |
| TAP_C_dom | ProSiteProfiles | TAP C-terminal (TAP-C) domain |
| NTF2-like_dom_sf | SUPERFAMILY | NTF2-like domain superfamily |
| NTF2 | Pfam | Nuclear transport factor 2 |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| transcription export complex | Hs | cellular component |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| mRNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nuclear pore | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| RNA export from nucleus | Hs | biological process |
| mRNA export from nucleus | Hs | biological process |
| multicellular organism development | Hs | biological process |
| viral process | Hs | biological process |
| nuclear speck | Hs | cellular component |
| poly(A)+ mRNA export from nucleus | Hs | biological process |
| nuclear RNA export factor complex | Hs | cellular component |
| nuclear inclusion body | Hs | cellular component |
| RNA transport | Hs | biological process |
| mRNA transport | Hs | biological process |
GO (Blast)
13 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| transcription export complex | Hs | cellular component | 326 | 4.88e-105 |
| nucleic acid binding | Hs | molecular function | 326 | 4.88e-105 |
| RNA binding | Hs | molecular function | 326 | 4.88e-105 |
| mRNA binding | Hs | molecular function | 326 | 4.88e-105 |
| protein binding | Hs | molecular function | 326 | 4.88e-105 |
| nucleus | Hs | cellular component | 326 | 4.88e-105 |
| nuclear pore | Hs | cellular component | 326 | 4.88e-105 |
| nucleoplasm | Hs | cellular component | 326 | 4.88e-105 |
| cytoplasm | Hs | cellular component | 326 | 4.88e-105 |
| cytosol | Hs | cellular component | 326 | 4.88e-105 |
| nuclear speck | Hs | cellular component | 326 | 4.88e-105 |
| nuclear RNA export factor complex | Hs | cellular component | 284 | 8.00e-89 |
| nuclear inclusion body | Hs | cellular component | 326 | 4.88e-105 |
GO (InterProScan)
7 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 8.84E-16 |
| RNA binding | Pfam | molecular function | 4.6E-26 |
| protein binding | SUPERFAMILY | molecular function | 7.4E-17 |
| nucleus | Pfam | cellular component | 4.6E-26 |
| cytoplasm | Pfam | cellular component | 4.6E-26 |
| mRNA export from nucleus | Pfam | biological process | 4.6E-26 |
| mRNA transport | SMART | biological process | 6.7E-21 |
