Aniseed - Gene card

Gene Card

Best human hits

CDK12; CDK13; CDK9

Species

C.savignyi

Unique Gene ID

Cisavi.g00007224

Gene Model ID

Cisavi.CG.ENS81.R4.1521607-1527759

Location

R4:1521606..1527759

Transcript Models and Sequences

Cisavi.CG.ENS81.R4.1521607-1527759.16071.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Ser/Thr_kinase_AS	ProSitePatterns	Serine/threonine-protein kinase, active site
Kinase-like_dom_sf	SUPERFAMILY	Protein kinase-like domain superfamily
Prot_kinase_dom	Pfam	Protein kinase domain
Prot_kinase_dom	SMART	Protein kinase domain
Prot_kinase_dom	ProSiteProfiles	Protein kinase domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

39 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	439	2.58e-142
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	194	1.12e-58
transcription coactivator binding	Hs	molecular function	194	1.12e-58
fibrillar center	Hs	cellular component	439	2.58e-142
cyclin K-CDK12 complex	Hs	cellular component	439	2.58e-142
cyclin K-CDK13 complex	Hs	cellular component	432	1.08e-139
DNA binding	Hs	molecular function	194	1.12e-58
chromatin binding	Hs	molecular function	194	1.12e-58
RNA binding	Hs	molecular function	432	1.08e-139
protein kinase activity	Hs	molecular function	439	2.58e-142
protein serine/threonine kinase activity	Hs	molecular function	439	2.58e-142
cyclin-dependent protein serine/threonine kinase activity	Hs	molecular function	439	2.58e-142
protein binding	Hs	molecular function	439	2.58e-142
ATP binding	Hs	molecular function	439	2.58e-142
extracellular region	Hs	cellular component	432	1.08e-139
extracellular space	Hs	cellular component	432	1.08e-139
nucleus	Hs	cellular component	439	2.58e-142
nucleoplasm	Hs	cellular component	439	2.58e-142
chromosome	Hs	cellular component	439	2.58e-142
cytoplasm	Hs	cellular component	194	1.12e-58
Golgi apparatus	Hs	cellular component	432	1.08e-139
cytosol	Hs	cellular component	432	1.08e-139
transcription elongation factor complex	Hs	cellular component	194	1.12e-58
cyclin/CDK positive transcription elongation factor complex	Hs	cellular component	439	2.58e-142
transcription factor binding	Hs	molecular function	439	2.58e-142
RNA polymerase II carboxy-terminal domain kinase activity	Hs	molecular function	439	2.58e-142
membrane	Hs	cellular component	194	1.12e-58
kinase activity	Hs	molecular function	439	2.58e-142
PML body	Hs	cellular component	194	1.12e-58
nuclear speck	Hs	cellular component	439	2.58e-142
transferase activity	Hs	molecular function	439	2.58e-142
snRNA binding	Hs	molecular function	194	1.12e-58
protein kinase binding	Hs	molecular function	439	2.58e-142
nuclear cyclin-dependent protein kinase holoenzyme complex	Hs	cellular component	439	2.58e-142
cyclin binding	Hs	molecular function	439	2.58e-142
cytoplasmic ribonucleoprotein granule	Hs	cellular component	194	1.12e-58
transcription regulatory region DNA binding	Hs	molecular function	439	2.58e-142
7SK snRNA binding	Hs	molecular function	194	1.12e-58
ficolin-1-rich granule lumen	Hs	cellular component	432	1.08e-139

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
protein kinase activity	Pfam	molecular function	1.8E-50
ATP binding	Pfam	molecular function	1.8E-50
protein phosphorylation	Pfam	biological process	1.8E-50