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Gene Card

Best human hits

DR1; NFYB; POLE3

Species

C.savignyi

Unique Gene ID

Cisavi.g00007462

Gene Model ID

Cisavi.CG.ENS81.R41.2668302-2671144

Location

R41:2668301..2671144

Transcript Models and Sequences

  Cisavi.CG.ENS81.R41.2668302-2671144.15114.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Histone-fold Gene3D Histone-fold
Transcrpt_fac_NFYB/HAP3_CS ProSitePatterns Transcription factor, NFYB/HAP3, conserved site
Histone-fold SUPERFAMILY Histone-fold
CBFA_NFYB_domain Pfam Transcription factor CBF/NF-Y/archaeal histone domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
CCAAT-binding factor complex Hs cellular component
protein-DNA complex Hs cellular component
sequence-specific DNA binding Hs molecular function
transcription regulatory region DNA binding Hs molecular function
positive regulation of transcription, DNA-templated Hs biological process
protein heterodimerization activity Hs molecular function
repressing transcription factor binding Hs molecular function
RNA polymerase II transcription factor complex Hs cellular component

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 190 1.11e-61
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 190 1.11e-61
DNA binding Hs molecular function 190 1.11e-61
transcription factor activity, sequence-specific DNA binding Hs molecular function 190 1.11e-61
transcription corepressor activity Hs molecular function 70.9 1.44e-15
DNA-directed DNA polymerase activity Hs molecular function 65.9 5.19e-14
protein binding Hs molecular function 190 1.11e-61
nucleus Hs cellular component 190 1.11e-61
nucleoplasm Hs cellular component 190 1.11e-61
Ada2/Gcn5/Ada3 transcription activator complex Hs cellular component 70.9 1.44e-15
transcription factor binding Hs molecular function 70.9 1.44e-15
epsilon DNA polymerase complex Hs cellular component 65.9 5.19e-14
CCAAT-binding factor complex Hs cellular component 190 1.11e-61
transferase activity Hs molecular function 65.9 5.19e-14
nucleotidyltransferase activity Hs molecular function 65.9 5.19e-14
TBP-class protein binding Hs molecular function 70.9 1.44e-15
protein-DNA complex Hs cellular component 190 1.11e-61
sequence-specific DNA binding Hs molecular function 190 1.11e-61
transcription regulatory region DNA binding Hs molecular function 190 1.11e-61
protein heterodimerization activity Hs molecular function 190 1.11e-61
repressing transcription factor binding Hs molecular function 190 1.11e-61
RNA polymerase II transcription factor complex Hs cellular component 190 1.11e-61

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleus ProSitePatterns cellular component
regulation of transcription, DNA-templated ProSitePatterns biological process
sequence-specific DNA binding ProSitePatterns molecular function
protein heterodimerization activity Gene3D molecular function 1.4E-41

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