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GENE CARD

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Gene Card

Best human hits

H1FOO

Species

C.savignyi

Unique Gene ID

Cisavi.g00007703

Gene Model ID

Cisavi.CG.ENS81.R44.1629793-1632363

Location

R44:1629792..1632363

Transcript Models and Sequences

  Cisavi.CG.ENS81.R44.1629793-1632363.13725.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Histone_H1/H5_H15 ProSiteProfiles Linker histone H1/H5, domain H15
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
Histone_H1/H5_H15 Pfam Linker histone H1/H5, domain H15
Histone_H1/H5_H15 SMART Linker histone H1/H5, domain H15

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleosome Hs cellular component
DNA binding Hs molecular function
nucleus Hs cellular component
chromosome Hs cellular component
cytoplasm Hs cellular component
nucleosome assembly Hs biological process
nucleosome positioning Hs biological process
nucleosomal DNA binding Hs molecular function
regulation of DNA methylation Hs biological process
meiotic cell cycle Hs biological process
extracellular exosome Hs cellular component
negative regulation of stem cell differentiation Hs biological process

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleosome Hs cellular component 37.4 0.003
DNA binding Hs molecular function 37.4 0.003
nucleus Hs cellular component 37.4 0.003
chromosome Hs cellular component 37.4 0.003
cytoplasm Hs cellular component 37.4 0.003
nucleosomal DNA binding Hs molecular function 37.4 0.003
extracellular exosome Hs cellular component 37.4 0.003

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleosome Pfam cellular component 5.7E-16
DNA binding Pfam molecular function 5.7E-16
nucleus Pfam cellular component 5.7E-16
nucleosome assembly Pfam biological process 5.7E-16