Aniseed - Gene card

Gene Card

Best human hits

NTN1; NTN3; NTN5

Species

C.savignyi

Unique Gene ID

Cisavi.g00007801

Gene Model ID

Cisavi.CG.ENS81.R451.139947-147158

Location

R451:139946..147158

Transcript Models and Sequences

Cisavi.CG.ENS81.R451.139947-147158.00030.t
Cisavi.CG.ENS81.R451.139947-147158.00031.t
Cisavi.CG.ENS81.R451.139947-147158.00032.t
Cisavi.CG.ENS81.R451.139947-147158.00033.t
Cisavi.CG.ENS81.R451.139947-147158.00034.t
Cisavi.CG.ENS81.R451.139947-147158.00035.t
Cisavi.CG.ENS81.R451.139947-147158.00036.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term	Analysis	Definition
Galactose-bd-like_sf	SUPERFAMILY	Galactose-binding-like domain superfamily
TIMP-like_OB-fold	SUPERFAMILY	Tissue inhibitor of metalloproteinases-like, OB-fold
Laminin_EGF	ProSitePatterns	Laminin EGF domain
Laminin_N	SMART	Laminin, N-terminal
Laminin_N	Pfam	Laminin, N-terminal
Laminin_N_sf	Gene3D	Laminin, N-terminal domain superfamily
Netrin_module_non-TIMP	Pfam	Netrin module, non-TIMP type
Laminin_N	ProSiteProfiles	Laminin, N-terminal
Laminin_EGF	ProSiteProfiles	Laminin EGF domain
Laminin_EGF	SMART	Laminin EGF domain
Netrin_module_non-TIMP	SMART	Netrin module, non-TIMP type
Netrin_domain	ProSiteProfiles	Netrin domain
Laminin_EGF	Pfam	Laminin EGF domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
receptor binding	Hs	molecular function	258	2.55e-77
protein binding	Hs	molecular function	315	5.16e-99
extracellular region	Hs	cellular component	315	5.16e-99
proteinaceous extracellular matrix	Hs	cellular component	315	5.16e-99
basement membrane	Hs	cellular component	315	5.16e-99
cytoplasm	Hs	cellular component	315	5.16e-99
Golgi apparatus	Hs	cellular component	258	2.55e-77

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	ProSiteProfiles	molecular function	21.582