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Regulatory Regions

Regulatory Regions

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Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
Ski2_C Pfam ATP-dependent RNA helicase Ski2, C-terminal
Helicase_C ProSiteProfiles Helicase, C-terminal
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase_C CDD Helicase, C-terminal
Helicase_C SMART Helicase, C-terminal
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
rRNA_proc-arch_dom Pfam rRNA-processing arch domain
Ski2_C SMART ATP-dependent RNA helicase Ski2, C-terminal
Helicase_C Pfam Helicase, C-terminal
Ski2-like PIRSF ATP-dependent RNA helicase Ski2-like
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
exosome (RNase complex) Hs cellular component
mRNA splicing, via spliceosome Hs biological process
maturation of 5.8S rRNA Hs biological process
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
RNA helicase activity Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
spliceosomal complex Hs cellular component
nucleolus Hs cellular component
rRNA processing Hs biological process
mRNA processing Hs biological process
RNA catabolic process Hs biological process
RNA splicing Hs biological process
hydrolase activity Hs molecular function
catalytic step 2 spliceosome Hs cellular component

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 1337 0.0
exosome (RNase complex) Hs cellular component 1337 0.0
nucleic acid binding Hs molecular function 1337 0.0
RNA binding Hs molecular function 1337 0.0
RNA helicase activity Hs molecular function 1337 0.0
ATP-dependent RNA helicase activity Hs molecular function 1337 0.0
helicase activity Hs molecular function 1337 0.0
protein binding Hs molecular function 1337 0.0
ATP binding Hs molecular function 1337 0.0
nucleus Hs cellular component 1337 0.0
nucleoplasm Hs cellular component 1337 0.0
spliceosomal complex Hs cellular component 1337 0.0
nucleolus Hs cellular component 1337 0.0
cytoplasm Hs cellular component 516 1.01e-163
cytosol Hs cellular component 516 1.01e-163
hydrolase activity Hs molecular function 1337 0.0
Ski complex Hs cellular component 516 1.01e-163
catalytic step 2 spliceosome Hs cellular component 1337 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 3.2E-16
RNA binding PIRSF molecular function 0.0
RNA helicase activity PIRSF molecular function 0.0
ATP binding Pfam molecular function 3.2E-16
RNA catabolic process PIRSF biological process 0.0