Gene Card
Best human hits
MTREX; SKIV2L
Species
Unique Gene ID
Cisavi.g00007938
Gene Model ID
Cisavi.CG.ENS81.R48.1003367-1012890
Location
R48:1003366..1012890
Transcript Models and Sequences
Cisavi.CG.ENS81.R48.1003367-1012890.16004.t
Cisavi.CG.ENS81.R48.1003367-1012890.16005.t
Cisavi.CG.ENS81.R48.1003367-1012890.16006.t
Cisavi.CG.ENS81.R48.1003367-1012890.16007.t
Cisavi.CG.ENS81.R48.1003367-1012890.16008.t
Cisavi.CG.ENS81.R48.1003367-1012890.16009.t
Cisavi.CG.ENS81.R48.1003367-1012890.16010.t
Cisavi.CG.ENS81.R48.1003367-1012890.16011.t
n/a
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IPR Term | Analysis | Definition |
---|---|---|
Helicase_ATP-bd | SMART | Helicase superfamily 1/2, ATP-binding domain |
Ski2_C | Pfam | ATP-dependent RNA helicase Ski2, C-terminal |
Helicase_C | ProSiteProfiles | Helicase, C-terminal |
P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
Helicase_C | CDD | Helicase, C-terminal |
Helicase_C | SMART | Helicase, C-terminal |
Helicase_ATP-bd | ProSiteProfiles | Helicase superfamily 1/2, ATP-binding domain |
rRNA_proc-arch_dom | Pfam | rRNA-processing arch domain |
Ski2_C | SMART | ATP-dependent RNA helicase Ski2, C-terminal |
Helicase_C | Pfam | Helicase, C-terminal |
Ski2-like | PIRSF | ATP-dependent RNA helicase Ski2-like |
DEAD/DEAH_box_helicase_dom | Pfam | DEAD/DEAH box helicase domain |
GO Term | Annotation Origin | Type |
---|
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
nucleotide binding | Hs | molecular function |
exosome (RNase complex) | Hs | cellular component |
mRNA splicing, via spliceosome | Hs | biological process |
maturation of 5.8S rRNA | Hs | biological process |
nucleic acid binding | Hs | molecular function |
RNA binding | Hs | molecular function |
RNA helicase activity | Hs | molecular function |
ATP-dependent RNA helicase activity | Hs | molecular function |
helicase activity | Hs | molecular function |
protein binding | Hs | molecular function |
ATP binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
spliceosomal complex | Hs | cellular component |
nucleolus | Hs | cellular component |
rRNA processing | Hs | biological process |
mRNA processing | Hs | biological process |
RNA catabolic process | Hs | biological process |
RNA splicing | Hs | biological process |
hydrolase activity | Hs | molecular function |
catalytic step 2 spliceosome | Hs | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
nucleotide binding | Hs | molecular function | 1337 | 0.0 |
exosome (RNase complex) | Hs | cellular component | 1337 | 0.0 |
nucleic acid binding | Hs | molecular function | 1337 | 0.0 |
RNA binding | Hs | molecular function | 1337 | 0.0 |
RNA helicase activity | Hs | molecular function | 1337 | 0.0 |
ATP-dependent RNA helicase activity | Hs | molecular function | 1337 | 0.0 |
helicase activity | Hs | molecular function | 1337 | 0.0 |
protein binding | Hs | molecular function | 1337 | 0.0 |
ATP binding | Hs | molecular function | 1337 | 0.0 |
nucleus | Hs | cellular component | 1337 | 0.0 |
nucleoplasm | Hs | cellular component | 1337 | 0.0 |
spliceosomal complex | Hs | cellular component | 1337 | 0.0 |
nucleolus | Hs | cellular component | 1337 | 0.0 |
cytoplasm | Hs | cellular component | 516 | 1.01e-163 |
cytosol | Hs | cellular component | 516 | 1.01e-163 |
hydrolase activity | Hs | molecular function | 1337 | 0.0 |
Ski complex | Hs | cellular component | 516 | 1.01e-163 |
catalytic step 2 spliceosome | Hs | cellular component | 1337 | 0.0 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleic acid binding | Pfam | molecular function | 3.2E-16 |
RNA binding | PIRSF | molecular function | 0.0 |
RNA helicase activity | PIRSF | molecular function | 0.0 |
ATP binding | Pfam | molecular function | 3.2E-16 |
RNA catabolic process | PIRSF | biological process | 0.0 |