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Gene Card

Best human hits

SALL1; SALL3

Species

C.savignyi

Unique Gene ID

Cisavi.g00008018

Gene Model ID

Cisavi.CG.ENS81.R48.1870472-1880304

Location

R48:1870471..1880304

Transcript Models and Sequences

  Cisavi.CG.ENS81.R48.1870472-1880304.18326.t
Cisavi.CG.ENS81.R48.1870472-1880304.18327.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

51 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
heterochromatin Hs cellular component
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
ureteric bud development Hs biological process
branching involved in ureteric bud morphogenesis Hs biological process
kidney development Hs biological process
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
histone deacetylase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
signal transduction Hs biological process
heart development Hs biological process
beta-catenin binding Hs molecular function
gonad development Hs biological process
chromocenter Hs cellular component
histone deacetylation Hs biological process
NuRD complex Hs cellular component
olfactory nerve development Hs biological process
pituitary gland development Hs biological process
neurogenesis Hs biological process
positive regulation of Wnt signaling pathway Hs biological process
adrenal gland development Hs biological process
somatic stem cell population maintenance Hs biological process
sequence-specific DNA binding Hs molecular function
transcription regulatory region DNA binding Hs molecular function
negative regulation of smoothened signaling pathway Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
embryonic digestive tract development Hs biological process
limb development Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
eye development Hs biological process
neural tube closure Hs biological process
transcription factor binding Hs molecular function
tissue development Hs biological process
stem cell population maintenance Hs biological process
neural tube development Hs biological process
embryonic limb morphogenesis Hs biological process
intracellular membrane-bounded organelle Hs cellular component

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
heterochromatin Hs cellular component 124 7.04e-29
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 124 7.04e-29
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 124 7.04e-29
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 124 7.04e-29
nucleic acid binding Hs molecular function 124 7.04e-29
DNA binding Hs molecular function 124 7.04e-29
transcription factor activity, sequence-specific DNA binding Hs molecular function 124 7.04e-29
histone deacetylase activity Hs molecular function 124 7.04e-29
protein binding Hs molecular function 124 7.04e-29
nucleus Hs cellular component 124 7.04e-29
nucleoplasm Hs cellular component 124 7.04e-29
cytoplasm Hs cellular component 124 7.04e-29
beta-catenin binding Hs molecular function 124 7.04e-29
chromocenter Hs cellular component 124 7.04e-29
NuRD complex Hs cellular component 124 7.04e-29
sequence-specific DNA binding Hs molecular function 124 7.04e-29
transcription regulatory region DNA binding Hs molecular function 124 7.04e-29
metal ion binding Hs molecular function 124 7.04e-29

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 3.4E-4

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