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GENE CARD

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Gene Card

Best human hits

IARS; IARS2; VARS

Species

C.savignyi

Unique Gene ID

Cisavi.g00008179

Gene Model ID

Cisavi.CG.ENS81.R48.525249-538062

Location

R48:525248..538062

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
M/V/L/I-tRNA-synth_anticd-bd Pfam Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
tRNAsynth_Ia_anticodon-bd SUPERFAMILY Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
Rossmann-like_a/b/a_fold Gene3D Rossmann-like alpha/beta/alpha sandwich fold
Anticodon_Ile_ABEc CDD Isoleucyl tRNA synthetase type 2, anticodon-binding domain
Ile-tRNA-ligase_type2 Hamap Isoleucine-tRNA ligase, type 2
Val/Leu/Ile-tRNA-synth_edit Gene3D Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
Ile-tRNA-ligase PRINTS Isoleucine-tRNA ligase
Ile-tRNA-ligase TIGRFAM Isoleucine-tRNA ligase
aa-tRNA-synth_I_CS ProSitePatterns Aminoacyl-tRNA synthetase, class I, conserved site
Val/Leu/Ile-tRNA-synth_edit SUPERFAMILY Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
aa-tRNA-synth_Ia Pfam Aminoacyl-tRNA synthetase, class Ia

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
tRNA binding Hs molecular function
nucleotide binding Hs molecular function
osteoblast differentiation Hs biological process
aminoacyl-tRNA editing activity Hs molecular function
aminoacyl-tRNA ligase activity Hs molecular function
isoleucine-tRNA ligase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
translation Hs biological process
tRNA aminoacylation for protein translation Hs biological process
isoleucyl-tRNA aminoacylation Hs biological process
membrane Hs cellular component
ligase activity Hs molecular function
aminoacyl-tRNA synthetase multienzyme complex Hs cellular component
GTPase binding Hs molecular function
extracellular exosome Hs cellular component

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
tRNA binding Hs molecular function 1656 0.0
nucleotide binding Hs molecular function 1656 0.0
aminoacyl-tRNA editing activity Hs molecular function 1656 0.0
aminoacyl-tRNA ligase activity Hs molecular function 1656 0.0
isoleucine-tRNA ligase activity Hs molecular function 1656 0.0
valine-tRNA ligase activity Hs molecular function 147 1.18e-35
protein binding Hs molecular function 1656 0.0
ATP binding Hs molecular function 1656 0.0
cytoplasm Hs cellular component 1656 0.0
mitochondrion Hs cellular component 272 9.04e-76
mitochondrial matrix Hs cellular component 272 9.04e-76
cytosol Hs cellular component 1656 0.0
membrane Hs cellular component 1656 0.0
ligase activity Hs molecular function 1656 0.0
aminoacyl-tRNA synthetase multienzyme complex Hs cellular component 1656 0.0
GTPase binding Hs molecular function 1656 0.0
extracellular exosome Hs cellular component 1656 0.0

GO (InterProScan)

9 results

GO Term Analysis Type e-value
tRNA binding CDD molecular function 3.71812E-83
nucleotide binding Pfam molecular function 9.6E-73
aminoacyl-tRNA editing activity SUPERFAMILY molecular function 5.55E-47
aminoacyl-tRNA ligase activity Pfam molecular function 1.5E-230
isoleucine-tRNA ligase activity TIGRFAM molecular function 1.4E-284
ATP binding Pfam molecular function 9.6E-73
cytoplasm TIGRFAM cellular component 1.4E-284
tRNA aminoacylation for protein translation Pfam biological process 9.6E-73
isoleucyl-tRNA aminoacylation TIGRFAM biological process 1.4E-284