Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

LDB3; PDLIM1; PDLIM3

Species

C.savignyi

Unique Gene ID

Cisavi.g00008427

Gene Model ID

Cisavi.CG.ENS81.R49.2860320-2864263

Location

R49:2860319..2864263

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
PDZ Pfam PDZ domain
PDZ ProSiteProfiles PDZ domain
DUF4749 Pfam Domain of unknown function DUF4749
PDZ SMART PDZ domain
Zasp-like_motif SMART Zasp-like motif
PDZ_sf SUPERFAMILY PDZ superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

41 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
response to hypoxia Hs biological process
transcription coactivator activity Hs molecular function
protein binding Hs molecular function
transcription factor complex Hs cellular component
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
cell-cell adherens junction Hs cellular component
focal adhesion Hs cellular component
regulation of transcription, DNA-templated Hs biological process
response to oxidative stress Hs biological process
actin filament organization Hs biological process
heart development Hs biological process
cytoskeletal protein binding Hs molecular function
structural constituent of muscle Hs molecular function
actin cytoskeleton Hs cellular component
Z disc Hs cellular component
cell projection Hs cellular component
metal ion binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
cell-cell adhesion Hs biological process
cadherin binding involved in cell-cell adhesion Hs molecular function
stress fiber Hs cellular component
nucleus Hs cellular component
endosome Hs cellular component
membrane Hs cellular component
protein phosphatase binding Hs molecular function
lamellipodium Hs cellular component
cell junction Hs cellular component
actin cytoskeleton reorganization Hs biological process
early endosome membrane Hs cellular component
early endosome lumen Hs cellular component
filamentous actin Hs cellular component
recycling endosome lumen Hs cellular component
protein homodimerization activity Hs molecular function
neuron projection Hs cellular component
dendritic spine Hs cellular component
synapse Hs cellular component
postsynaptic membrane Hs cellular component
alpha-actinin binding Hs molecular function
recycling endosome membrane Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transcription coactivator activity Hs molecular function 92.8 3.26e-22
protein kinase C binding Hs molecular function 94.4 5.00e-22
protein binding Hs molecular function 124 1.37e-33
transcription factor complex Hs cellular component 92.8 3.26e-22
cytoplasm Hs cellular component 124 1.37e-33
cytoskeleton Hs cellular component 94.4 5.00e-22
cell-cell adherens junction Hs cellular component 92.8 3.26e-22
focal adhesion Hs cellular component 92.8 3.26e-22
cytoskeletal protein binding Hs molecular function 124 1.37e-33
structural constituent of muscle Hs molecular function 124 1.37e-33
actin cytoskeleton Hs cellular component 124 1.37e-33
Z disc Hs cellular component 124 1.37e-33
pseudopodium Hs cellular component 94.4 5.00e-22
cell projection Hs cellular component 94.4 5.00e-22
metal ion binding Hs molecular function 124 1.37e-33
perinuclear region of cytoplasm Hs cellular component 94.4 5.00e-22
muscle alpha-actinin binding Hs molecular function 94.4 5.00e-22
cadherin binding involved in cell-cell adhesion Hs molecular function 92.8 3.26e-22

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 8.02E-18