Aniseed - Gene card

Gene 'Cisavi.CG.ENS81.R54....'

Gene Card

Best human hits

CTPS1; CTPS2

Species

C.savignyi

Unique Gene ID

Cisavi.g00009033

Gene Model ID

Cisavi.CG.ENS81.R54.28860-56191

Location

R54:28859..56191

Transcript Models and Sequences

Cisavi.CG.ENS81.R54.28860-56191.07086.t
Cisavi.CG.ENS81.R54.28860-56191.07087.t
Cisavi.CG.ENS81.R54.28860-56191.07088.t
Cisavi.CG.ENS81.R54.28860-56191.07089.t
Cisavi.CG.ENS81.R54.28860-56191.07090.t
Cisavi.CG.ENS81.R54.28860-56191.07091.t
Cisavi.CG.ENS81.R54.28860-56191.07092.t
Cisavi.CG.ENS81.R54.28860-56191.07093.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
Class_I_gatase-like	SUPERFAMILY	Class I glutamine amidotransferase-like
GATase1_CTP_Synthase	CDD	CTP synthase GATase domain
Class_I_gatase-like	Gene3D	Class I glutamine amidotransferase-like
GATASE	ProSiteProfiles	Glutamine amidotransferase
CTP_synthase_N	Pfam	CTP synthase, N-terminal
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
CTP_synthase	TIGRFAM	CTP synthase
CTP_synthase	PANTHER	CTP synthase
GATASE	Pfam	Glutamine amidotransferase

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
immune system process	Hs	biological process
CTP synthase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
mitochondrion	Hs	cellular component
cytosol	Hs	cellular component
nucleobase-containing compound metabolic process	Hs	biological process
pyrimidine nucleotide metabolic process	Hs	biological process
pyrimidine nucleotide biosynthetic process	Hs	biological process
CTP biosynthetic process	Hs	biological process
glutamine metabolic process	Hs	biological process
membrane	Hs	cellular component
ligase activity	Hs	molecular function
B cell proliferation	Hs	biological process
response to drug	Hs	biological process
identical protein binding	Hs	molecular function
'de novo' CTP biosynthetic process	Hs	biological process

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
nucleotide binding	Hs	molecular function	813
CTP synthase activity	Hs	molecular function	813
protein binding	Hs	molecular function	813
ATP binding	Hs	molecular function	813
mitochondrion	Hs	cellular component	813
cytosol	Hs	cellular component	813
membrane	Hs	cellular component	811
ligase activity	Hs	molecular function	813
identical protein binding	Hs	molecular function	811

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
CTP synthase activity	PANTHER	molecular function	0.0
pyrimidine nucleotide biosynthetic process	PANTHER	biological process	0.0
CTP biosynthetic process	CDD	biological process	2.7387E-130