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GENE CARD

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Gene Card

Best human hits

OPN1SW; RGR; RRH

Species

C.savignyi

Unique Gene ID

Cisavi.g00009083

Gene Model ID

Cisavi.CG.ENS81.R54.3583560-3589162

Location

R54:3583559..3589162

Transcript Models and Sequences

  Cisavi.CG.ENS81.R54.3583560-3589162.18916.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
GPCR_Rhodpsn Pfam G protein-coupled receptor, rhodopsin-like
GPCR_Rhodpsn PRINTS G protein-coupled receptor, rhodopsin-like
GPCR_Rhodpsn_7TM ProSiteProfiles GPCR, rhodopsin-like, 7TM

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
photoreceptor outer segment Hs cellular component 65.9 2.65e-12
signal transducer activity Hs molecular function 80.5 1.52e-17
receptor activity Hs molecular function 65.9 2.65e-12
G-protein coupled receptor activity Hs molecular function 80.5 1.52e-17
protein binding Hs molecular function 80.5 1.52e-17
integral component of plasma membrane Hs cellular component 80.5 1.52e-17
G-protein coupled photoreceptor activity Hs molecular function 80.5 1.52e-17
photoreceptor activity Hs molecular function 80.5 1.52e-17
membrane Hs cellular component 80.5 1.52e-17
integral component of membrane Hs cellular component 80.5 1.52e-17
photoreceptor disc membrane Hs cellular component 65.9 2.65e-12

GO (InterProScan)

3 results

GO Term Analysis Type e-value
G-protein coupled receptor activity Pfam molecular function 9.9E-21
G-protein coupled receptor signaling pathway Pfam biological process 9.9E-21
integral component of membrane Pfam cellular component 9.9E-21