Aniseed - Gene card

Gene Card

Best human hits

NVL; SPATA5; VCP

Species

C.savignyi

Unique Gene ID

Cisavi.g00009146

Gene Model ID

Cisavi.CG.ENS81.R54.881324-888249

Location

R54:881323..888249

Transcript Models and Sequences

Cisavi.CG.ENS81.R54.881324-888249.12370.t
Cisavi.CG.ENS81.R54.881324-888249.12371.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
ATPase_AAA_core	Pfam	ATPase, AAA-type, core
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
ATPase_AAA_CS	ProSitePatterns	ATPase, AAA-type, conserved site
AAA+_ATPase	SMART	AAA+ ATPase domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
telomerase holoenzyme complex	Hs	cellular component
nucleolus	Hs	cellular component
membrane	Hs	cellular component
ribosome biogenesis	Hs	biological process
preribosome binding	Hs	molecular function

GO (Blast)

47 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	693	0.0
proteasome complex	Hs	cellular component	435	1.46e-143
RNA binding	Hs	molecular function	693	0.0
receptor binding	Hs	molecular function	435	1.46e-143
protein binding	Hs	molecular function	693	0.0
ATP binding	Hs	molecular function	693	0.0
extracellular region	Hs	cellular component	435	1.46e-143
nucleus	Hs	cellular component	693	0.0
nucleoplasm	Hs	cellular component	693	0.0
telomerase holoenzyme complex	Hs	cellular component	693	0.0
nucleolus	Hs	cellular component	693	0.0
cytoplasm	Hs	cellular component	435	1.46e-143
mitochondrion	Hs	cellular component	386	7.94e-124
endoplasmic reticulum	Hs	cellular component	435	1.46e-143
endoplasmic reticulum membrane	Hs	cellular component	435	1.46e-143
lipid droplet	Hs	cellular component	435	1.46e-143
cytosol	Hs	cellular component	435	1.46e-143
lipid binding	Hs	molecular function	435	1.46e-143
membrane	Hs	cellular component	693	0.0
hydrolase activity	Hs	molecular function	435	1.46e-143
ATPase activity	Hs	molecular function	435	1.46e-143
protein phosphatase binding	Hs	molecular function	435	1.46e-143
protein domain specific binding	Hs	molecular function	435	1.46e-143
polyubiquitin modification-dependent protein binding	Hs	molecular function	435	1.46e-143
ubiquitin protein ligase binding	Hs	molecular function	435	1.46e-143
macromolecular complex	Hs	cellular component	435	1.46e-143
VCP-NPL4-UFD1 AAA ATPase complex	Hs	cellular component	435	1.46e-143
secretory granule lumen	Hs	cellular component	435	1.46e-143
azurophil granule lumen	Hs	cellular component	435	1.46e-143
deubiquitinase activator activity	Hs	molecular function	435	1.46e-143
site of double-strand break	Hs	cellular component	435	1.46e-143
K48-linked polyubiquitin modification-dependent protein binding	Hs	molecular function	435	1.46e-143
Derlin-1 retrotranslocation complex	Hs	cellular component	435	1.46e-143
MHC class I protein binding	Hs	molecular function	435	1.46e-143
identical protein binding	Hs	molecular function	435	1.46e-143
myelin sheath	Hs	cellular component	435	1.46e-143
intracellular membrane-bounded organelle	Hs	cellular component	435	1.46e-143
ADP binding	Hs	molecular function	435	1.46e-143
ubiquitin-like protein ligase binding	Hs	molecular function	435	1.46e-143
perinuclear region of cytoplasm	Hs	cellular component	435	1.46e-143
extracellular exosome	Hs	cellular component	435	1.46e-143
BAT3 complex binding	Hs	molecular function	435	1.46e-143
ficolin-1-rich granule lumen	Hs	cellular component	435	1.46e-143
ATPase complex	Hs	cellular component	435	1.46e-143
preribosome binding	Hs	molecular function	693	0.0
ubiquitin-specific protease binding	Hs	molecular function	435	1.46e-143
VCP-NSFL1C complex	Hs	cellular component	435	1.46e-143

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
ATP binding	Pfam	molecular function	3.6E-48