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GENE CARD

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Gene Card

Best human hits

GATA2; GATA4; GATA6

Species

C.savignyi

Unique Gene ID

Cisavi.g00010789

Gene Model ID

Cisavi.CG.ENS81.R77.2996926-3008818

Location

R77:2996925..3008818

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Znf_NHR/GATA Gene3D Zinc finger, NHR/GATA-type
Znf_GATA PRINTS Zinc finger, GATA-type
Znf_GATA ProSitePatterns Zinc finger, GATA-type
Znf_GATA SMART Zinc finger, GATA-type
Znf_GATA Pfam Zinc finger, GATA-type
Znf_GATA ProSiteProfiles Zinc finger, GATA-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 155 2.27e-41
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 152 3.03e-39
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 140 5.53e-36
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 155 2.27e-41
transcription factor activity, RNA polymerase II transcription factor binding Hs molecular function 155 2.27e-41
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 140 5.53e-36
RNA polymerase II transcription factor binding Hs molecular function 155 2.27e-41
RNA polymerase II repressing transcription factor binding Hs molecular function 152 3.03e-39
enhancer sequence-specific DNA binding Hs molecular function 155 2.27e-41
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 155 2.27e-41
DNA binding Hs molecular function 155 2.27e-41
chromatin binding Hs molecular function 155 2.27e-41
transcription factor activity, sequence-specific DNA binding Hs molecular function 155 2.27e-41
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 152 3.03e-39
transcription coactivator activity Hs molecular function 155 2.27e-41
protein binding Hs molecular function 155 2.27e-41
nucleus Hs cellular component 155 2.27e-41
nucleoplasm Hs cellular component 155 2.27e-41
transcription factor complex Hs cellular component 152 3.03e-39
transcription factor binding Hs molecular function 155 2.27e-41
zinc ion binding Hs molecular function 155 2.27e-41
nuclear body Hs cellular component 155 2.27e-41
protein kinase binding Hs molecular function 155 2.27e-41
nuclear membrane Hs cellular component 152 3.03e-39
activating transcription factor binding Hs molecular function 155 2.27e-41
sequence-specific DNA binding Hs molecular function 155 2.27e-41
transcription regulatory region DNA binding Hs molecular function 155 2.27e-41
metal ion binding Hs molecular function 155 2.27e-41
NFAT protein binding Hs molecular function 155 2.27e-41
co-SMAD binding Hs molecular function 155 2.27e-41
C2H2 zinc finger domain binding Hs molecular function 140 5.53e-36
RNA polymerase II transcription factor complex Hs cellular component 155 2.27e-41

GO (InterProScan)

4 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding SMART molecular function 1.1E-22
regulation of transcription, DNA-templated Gene3D biological process 8.8E-27
zinc ion binding Gene3D molecular function 8.8E-27
sequence-specific DNA binding SMART molecular function 1.1E-22