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GENE CARD

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Gene Card

Best human hits

MSH2; SPATA6

Species

C.savignyi

Unique Gene ID

Cisavi.g00011036

Gene Model ID

Cisavi.CG.ENS81.R86.191350-205302

Location

R86:191349..205302

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
SPATA6_N Pfam Spermatogenesis-associated protein 6, N-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
extracellular region Hs cellular component
multicellular organism development Hs biological process
spermatogenesis Hs biological process
cell differentiation Hs biological process
myosin light chain binding Hs molecular function
cell projection Hs cellular component
motile cilium assembly Hs biological process
sperm connecting piece Hs cellular component

GO (Blast)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 39.7 8.38e-04
magnesium ion binding Hs molecular function 39.7 8.38e-04
four-way junction DNA binding Hs molecular function 39.7 8.38e-04
Y-form DNA binding Hs molecular function 39.7 8.38e-04
heteroduplex DNA loop binding Hs molecular function 39.7 8.38e-04
double-strand/single-strand DNA junction binding Hs molecular function 39.7 8.38e-04
nuclear chromosome, telomeric region Hs cellular component 39.7 8.38e-04
DNA binding Hs molecular function 39.7 8.38e-04
damaged DNA binding Hs molecular function 39.7 8.38e-04
double-stranded DNA binding Hs molecular function 39.7 8.38e-04
single-stranded DNA binding Hs molecular function 39.7 8.38e-04
protein binding Hs molecular function 39.7 8.38e-04
ATP binding Hs molecular function 39.7 8.38e-04
extracellular region Hs cellular component 48.5 9.07e-07
nucleus Hs cellular component 39.7 8.38e-04
nucleoplasm Hs cellular component 39.7 8.38e-04
protein C-terminus binding Hs molecular function 39.7 8.38e-04
DNA-dependent ATPase activity Hs molecular function 39.7 8.38e-04
membrane Hs cellular component 39.7 8.38e-04
ATPase activity Hs molecular function 39.7 8.38e-04
centromeric DNA binding Hs molecular function 39.7 8.38e-04
enzyme binding Hs molecular function 39.7 8.38e-04
protein kinase binding Hs molecular function 39.7 8.38e-04
mismatched DNA binding Hs molecular function 39.7 8.38e-04
myosin light chain binding Hs molecular function 48.5 9.07e-07
guanine/thymine mispair binding Hs molecular function 39.7 8.38e-04
dinucleotide insertion or deletion binding Hs molecular function 39.7 8.38e-04
single guanine insertion binding Hs molecular function 39.7 8.38e-04
single thymine insertion binding Hs molecular function 39.7 8.38e-04
dinucleotide repeat insertion binding Hs molecular function 39.7 8.38e-04
mismatch repair complex Hs cellular component 39.7 8.38e-04
MutSalpha complex Hs cellular component 39.7 8.38e-04
MutSbeta complex Hs cellular component 39.7 8.38e-04
oxidized purine DNA binding Hs molecular function 39.7 8.38e-04
MutLalpha complex binding Hs molecular function 39.7 8.38e-04
protein homodimerization activity Hs molecular function 39.7 8.38e-04
cell projection Hs cellular component 48.5 9.07e-07
ADP binding Hs molecular function 39.7 8.38e-04
sperm connecting piece Hs cellular component 48.5 9.07e-07

GO (InterProScan)

No result

GO Term Analysis Type e-value