Aniseed - Gene card

Gene Card

Best human hits

CHL1; L1CAM; NRCAM

Species

C.savignyi

Unique Gene ID

Cisavi.g00011552

Gene Model ID

Cisavi.CG.ENS81.R98.284679-309909

Location

R98:284678..309909

Transcript Models and Sequences

Cisavi.CG.ENS81.R98.284679-309909.03582.t
Cisavi.CG.ENS81.R98.284679-309909.03583.t
Cisavi.CG.ENS81.R98.284679-309909.03584.t
Cisavi.CG.ENS81.R98.284679-309909.03585.t
Cisavi.CG.ENS81.R98.284679-309909.03586.t
Cisavi.CG.ENS81.R98.284679-309909.03587.t
Cisavi.CG.ENS81.R98.284679-309909.03588.t
Cisavi.CG.ENS81.R98.284679-309909.03589.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term	Analysis	Definition
FN3_dom	CDD	Fibronectin type III
Neurofascin/L1/NrCAM_C	Pfam	Neurofascin/L1/NrCAM, C-terminal domain
Ig-like_fold	Gene3D	Immunoglobulin-like fold
Ig-like_dom_sf	SUPERFAMILY	Immunoglobulin-like domain superfamily
Ig_sub	SMART	Immunoglobulin subtype
Ig-like_dom	ProSiteProfiles	Immunoglobulin-like domain
FN3_sf	SUPERFAMILY	Fibronectin type III superfamily
FN3_dom	Pfam	Fibronectin type III
Ig_sub2	SMART	Immunoglobulin subtype 2
FN3_dom	ProSiteProfiles	Fibronectin type III
FN3_dom	SMART	Fibronectin type III
Ig_I-set	Pfam	Immunoglobulin I-set

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protease binding	Hs	molecular function	463	2.56e-143
protein binding	Hs	molecular function	496	5.47e-155
extracellular region	Hs	cellular component	496	5.47e-155
proteinaceous extracellular matrix	Hs	cellular component	463	2.56e-143
plasma membrane	Hs	cellular component	496	5.47e-155
integral component of plasma membrane	Hs	cellular component	496	5.47e-155
focal adhesion	Hs	cellular component	458	2.75e-141
external side of plasma membrane	Hs	cellular component	496	5.47e-155
cell surface	Hs	cellular component	458	2.75e-141
membrane	Hs	cellular component	496	5.47e-155
integral component of membrane	Hs	cellular component	496	5.47e-155
protein domain specific binding	Hs	molecular function	458	2.75e-141
axon	Hs	cellular component	496	5.47e-155
dendrite	Hs	cellular component	463	2.56e-143
growth cone	Hs	cellular component	458	2.75e-141
ankyrin binding	Hs	molecular function	496	5.47e-155
extracellular matrix	Hs	cellular component	458	2.75e-141
cell projection	Hs	cellular component	496	5.47e-155
neuron projection	Hs	cellular component	496	5.47e-155
neuronal cell body	Hs	cellular component	458	2.75e-141
axon initial segment	Hs	cellular component	496	5.47e-155
axonal growth cone	Hs	cellular component	458	2.75e-141
apical part of cell	Hs	cellular component	463	2.56e-143
synapse	Hs	cellular component	496	5.47e-155
extracellular exosome	Hs	cellular component	463	2.56e-143
protein binding involved in heterotypic cell-cell adhesion	Hs	molecular function	496	5.47e-155

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	1.89E-27