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Gene Card

Best human hits

EIF4A1; EIF4A2; EIF4A3

Species

H.aurantium

Unique Gene ID

Haaura.g00002366

Gene Model ID

Haaura.CG.MTP2014.S124.g02366

Location

S124:83098..87718

Transcript Models and Sequences

  Haaura.CG.MTP2014.S124.g02366.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
Helicase_C CDD Helicase, C-terminal
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase_C SMART Helicase, C-terminal
Helicase_C ProSiteProfiles Helicase, C-terminal
RNA-helicase_DEAD-box_CS ProSitePatterns ATP-dependent RNA helicase DEAD-box, conserved site
EIF4A PANTHER Eukaryotic initiation factor 4A
Helicase_C Pfam Helicase, C-terminal
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
nuclear-transcribed mRNA poly(A) tail shortening Hs biological process
RNA cap binding Hs molecular function
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
double-stranded RNA binding Hs molecular function
mRNA binding Hs molecular function
translation initiation factor activity Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
translation Hs biological process
translational initiation Hs biological process
regulation of translational initiation Hs biological process
translation factor activity, RNA binding Hs molecular function
regulation of gene expression Hs biological process
RNA secondary structure unwinding Hs biological process
membrane Hs cellular component
viral process Hs biological process
eukaryotic translation initiation factor 4F complex Hs cellular component
hydrolase activity Hs molecular function
ATPase activity Hs molecular function
perinuclear region of cytoplasm Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 635 0.0
RNA cap binding Hs molecular function 633 0.0
nucleic acid binding Hs molecular function 635 0.0
RNA binding Hs molecular function 635 0.0
double-stranded RNA binding Hs molecular function 633 0.0
mRNA binding Hs molecular function 633 0.0
translation initiation factor activity Hs molecular function 635 0.0
ATP-dependent RNA helicase activity Hs molecular function 635 0.0
helicase activity Hs molecular function 635 0.0
protein binding Hs molecular function 635 0.0
ATP binding Hs molecular function 635 0.0
nucleus Hs cellular component 547 0.0
nucleoplasm Hs cellular component 547 0.0
spliceosomal complex Hs cellular component 547 0.0
nucleolus Hs cellular component 635 0.0
cytoplasm Hs cellular component 633 0.0
cytosol Hs cellular component 635 0.0
translation factor activity, RNA binding Hs molecular function 633 0.0
poly(A) binding Hs molecular function 547 0.0
membrane Hs cellular component 633 0.0
eukaryotic translation initiation factor 4F complex Hs cellular component 635 0.0
nuclear speck Hs cellular component 547 0.0
hydrolase activity Hs molecular function 635 0.0
ATPase activity Hs molecular function 635 0.0
dendrite Hs cellular component 547 0.0
intracellular ribonucleoprotein complex Hs cellular component 547 0.0
exon-exon junction complex Hs cellular component 547 0.0
selenocysteine insertion sequence binding Hs molecular function 547 0.0
RNA stem-loop binding Hs molecular function 547 0.0
ribonucleoprotein complex binding Hs molecular function 547 0.0
neuronal cell body Hs cellular component 547 0.0
perinuclear region of cytoplasm Hs cellular component 635 0.0
extracellular exosome Hs cellular component 633 0.0
catalytic step 2 spliceosome Hs cellular component 547 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 5.0E-44
translation initiation factor activity PANTHER molecular function 9.2E-197
ATP-dependent RNA helicase activity PANTHER molecular function 9.2E-197
ATP binding Pfam molecular function 5.0E-44

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