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GENE CARD

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Gene Card

Best human hits

HMCN1; SPON1; SPON2

Species

H.aurantium

Unique Gene ID

Haaura.g00000424

Gene Model ID

Haaura.CG.MTP2014.S14.g00424

Location

S14:40272..51427

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat
Reeler_dom CDD Reeler domain
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
Reeler_dom ProSiteProfiles Reeler domain
Spondin_N Pfam Spondin, N-terminal
Spondin_N ProSiteProfiles Spondin, N-terminal
Spondin_N_sf Gene3D Spondin, N-terminal domain superfamily
Reeler_dom Pfam Reeler domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
extracellular space Hs cellular component
endoplasmic reticulum lumen Hs cellular component
cell adhesion Hs biological process
extracellular matrix Hs cellular component
protein O-linked fucosylation Hs biological process
metal ion binding Hs molecular function

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
lipopolysaccharide binding Hs molecular function 137 3.46e-35
antigen binding Hs molecular function 137 3.46e-35
calcium ion binding Hs molecular function 85.9 1.08e-16
protein binding Hs molecular function 489 9.49e-160
extracellular region Hs cellular component 489 9.49e-160
proteinaceous extracellular matrix Hs cellular component 489 9.49e-160
basement membrane Hs cellular component 85.9 1.08e-16
extracellular space Hs cellular component 489 9.49e-160
cytoplasm Hs cellular component 85.9 1.08e-16
endoplasmic reticulum lumen Hs cellular component 489 9.49e-160
cell cortex Hs cellular component 85.9 1.08e-16
cell junction Hs cellular component 85.9 1.08e-16
extracellular matrix Hs cellular component 489 9.49e-160
cleavage furrow Hs cellular component 85.9 1.08e-16
metal ion binding Hs molecular function 489 9.49e-160
extracellular exosome Hs cellular component 137 3.46e-35

GO (InterProScan)

No result

GO Term Analysis Type e-value