Aniseed - Gene card

Gene Card

Best human hits

ARF1; ARF3; ARF5

Species

H.aurantium

Unique Gene ID

Haaura.g00008345

Gene Model ID

Haaura.CG.MTP2014.S1446.g08345

Location

S1446:1037..2205

Transcript Models and Sequences

Haaura.CG.MTP2014.S1446.g08345.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Small_GTPase_ARF	ProSiteProfiles	Small GTPase superfamily, ARF type
Small_GTPase_ARF/SAR	Pfam	Small GTPase superfamily, ARF/SAR type
Small_GTP-bd_dom	TIGRFAM	Small GTP-binding protein domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
protein binding	Hs	molecular function
GTP binding	Hs	molecular function
intracellular	Hs	cellular component
hematopoietic progenitor cell differentiation	Hs	biological process
cytoplasmic vesicle	Hs	cellular component

GO (Blast)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	109	8.16e-32
nucleotide binding	Hs	molecular function	111	1.70e-32
RNA binding	Hs	molecular function	109	8.16e-32
GTPase activity	Hs	molecular function	111	1.70e-32
signal transducer activity, downstream of receptor	Hs	molecular function	109	8.16e-32
protein binding	Hs	molecular function	111	1.70e-32
GTP binding	Hs	molecular function	111	1.70e-32
intracellular	Hs	cellular component	111	1.70e-32
cytoplasm	Hs	cellular component	111	1.70e-32
Golgi apparatus	Hs	cellular component	111	1.70e-32
cytosol	Hs	cellular component	109	8.16e-32
plasma membrane	Hs	cellular component	111	1.70e-32
focal adhesion	Hs	cellular component	109	8.16e-32
postsynaptic density	Hs	cellular component	109	8.16e-32
membrane	Hs	cellular component	111	1.70e-32
protein domain specific binding	Hs	molecular function	109	8.16e-32
cell junction	Hs	cellular component	109	8.16e-32
cell leading edge	Hs	cellular component	109	8.16e-32
macromolecular complex	Hs	cellular component	109	8.16e-32
neuron projection	Hs	cellular component	109	8.16e-32
synapse	Hs	cellular component	109	8.16e-32
postsynaptic membrane	Hs	cellular component	109	8.16e-32
protein heterodimerization activity	Hs	molecular function	109	8.16e-32
perinuclear region of cytoplasm	Hs	cellular component	111	1.70e-32
extracellular exosome	Hs	cellular component	111	1.70e-32

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
GTP binding	Pfam	molecular function	2.3E-36
intracellular	ProSiteProfiles	cellular component	10.786