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GENE CARD

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Gene Card

Best human hits

CTCF; CTCFL; ZNF501

Species

H.aurantium

Unique Gene ID

Haaura.g00002664

Gene Model ID

Haaura.CG.MTP2014.S147.g02664

Location

S147:35816..40668

Transcript Models and Sequences

  Haaura.CG.MTP2014.S147.g02664.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
chromosome, centromeric region Hs cellular component 324 6.94e-100
condensed chromosome Hs cellular component 324 6.94e-100
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 324 6.94e-100
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 324 6.94e-100
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 319 2.13e-98
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 324 6.94e-100
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 324 6.94e-100
nucleic acid binding Hs molecular function 324 6.94e-100
DNA binding Hs molecular function 324 6.94e-100
chromatin binding Hs molecular function 324 6.94e-100
transcription factor activity, sequence-specific DNA binding Hs molecular function 324 6.94e-100
transcription corepressor activity Hs molecular function 324 6.94e-100
protein binding Hs molecular function 324 6.94e-100
nucleus Hs cellular component 324 6.94e-100
nucleoplasm Hs cellular component 324 6.94e-100
chromosome Hs cellular component 324 6.94e-100
nucleolus Hs cellular component 324 6.94e-100
cytoplasm Hs cellular component 319 2.13e-98
zinc ion binding Hs molecular function 324 6.94e-100
histone binding Hs molecular function 319 2.13e-98
chromatin insulator sequence binding Hs molecular function 324 6.94e-100
sequence-specific DNA binding Hs molecular function 324 6.94e-100
transcription regulatory region DNA binding Hs molecular function 324 6.94e-100
metal ion binding Hs molecular function 324 6.94e-100

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.0012