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Gene Card

Best human hits

DDX6; EIF4A2; EIF4A3

Species

H.aurantium

Unique Gene ID

Haaura.g00008856

Gene Model ID

Haaura.CG.MTP2014.S1764.g08856

Location

S1764:794..3564

Transcript Models and Sequences

  Haaura.CG.MTP2014.S1764.g08856.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif
Helicase_C ProSiteProfiles Helicase, C-terminal
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
RNA-helicase_DEAD-box_CS ProSitePatterns ATP-dependent RNA helicase DEAD-box, conserved site
Helicase_C CDD Helicase, C-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
heterochromatin Hs cellular component
P-body Hs cellular component
outer dense fiber Hs cellular component
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
RNA helicase activity Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
cytosol Hs cellular component
regulation of translation Hs biological process
spermatogenesis Hs biological process
cytoplasmic stress granule Hs cellular component
RNA secondary structure unwinding Hs biological process
membrane Hs cellular component
RISC complex Hs cellular component
hydrolase activity Hs molecular function
stem cell population maintenance Hs biological process
protein domain specific binding Hs molecular function
cytoplasmic mRNA processing body assembly Hs biological process
cytoplasmic ribonucleoprotein granule Hs cellular component
P granule Hs cellular component
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay Hs biological process
cadherin binding Hs molecular function
negative regulation of neuron differentiation Hs biological process
sperm annulus Hs cellular component

GO (Blast)

42 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 488 2.11e-172
heterochromatin Hs cellular component 488 2.11e-172
P-body Hs cellular component 488 2.11e-172
outer dense fiber Hs cellular component 488 2.11e-172
nucleic acid binding Hs molecular function 488 2.11e-172
RNA binding Hs molecular function 488 2.11e-172
RNA helicase activity Hs molecular function 488 2.11e-172
mRNA binding Hs molecular function 192 8.78e-58
translation initiation factor activity Hs molecular function 186 1.80e-55
ATP-dependent RNA helicase activity Hs molecular function 488 2.11e-172
helicase activity Hs molecular function 488 2.11e-172
protein binding Hs molecular function 488 2.11e-172
ATP binding Hs molecular function 488 2.11e-172
nucleus Hs cellular component 488 2.11e-172
nucleoplasm Hs cellular component 192 8.78e-58
spliceosomal complex Hs cellular component 192 8.78e-58
nucleolus Hs cellular component 488 2.11e-172
cytoplasm Hs cellular component 488 2.11e-172
mitochondrion Hs cellular component 488 2.11e-172
cytosol Hs cellular component 488 2.11e-172
poly(A) binding Hs molecular function 192 8.78e-58
cytoplasmic stress granule Hs cellular component 488 2.11e-172
membrane Hs cellular component 488 2.11e-172
eukaryotic translation initiation factor 4F complex Hs cellular component 186 1.80e-55
RISC complex Hs cellular component 488 2.11e-172
nuclear speck Hs cellular component 192 8.78e-58
hydrolase activity Hs molecular function 488 2.11e-172
ATPase activity Hs molecular function 186 1.80e-55
protein domain specific binding Hs molecular function 488 2.11e-172
dendrite Hs cellular component 192 8.78e-58
intracellular ribonucleoprotein complex Hs cellular component 192 8.78e-58
exon-exon junction complex Hs cellular component 192 8.78e-58
selenocysteine insertion sequence binding Hs molecular function 192 8.78e-58
RNA stem-loop binding Hs molecular function 192 8.78e-58
cytoplasmic ribonucleoprotein granule Hs cellular component 488 2.11e-172
ribonucleoprotein complex binding Hs molecular function 192 8.78e-58
neuronal cell body Hs cellular component 192 8.78e-58
P granule Hs cellular component 488 2.11e-172
cadherin binding Hs molecular function 488 2.11e-172
perinuclear region of cytoplasm Hs cellular component 186 1.80e-55
catalytic step 2 spliceosome Hs cellular component 192 8.78e-58
sperm annulus Hs cellular component 488 2.11e-172

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 4.6E-39
ATP binding Pfam molecular function 4.6E-39

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