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GENE CARD

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Gene Card

Best human hits

LHX1; LMX1A; LMX1B

Species

H.aurantium

Unique Gene ID

Haaura.g00009209

Gene Model ID

Haaura.CG.MTP2014.S2042.g09209

Location

S2042:7314..9939

Transcript Models and Sequences

  Haaura.CG.MTP2014.S2042.g09209.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Znf_LIM Pfam Zinc finger, LIM-type
Homeobox_CS ProSitePatterns Homeobox, conserved site
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Homeobox_dom ProSiteProfiles Homeobox domain
Homeobox_dom Pfam Homeobox domain
Homeobox_dom SMART Homeobox domain
Homeobox_dom CDD Homeobox domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription factor activity, RNA polymerase II core promoter sequence-specific Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
regulation of cell growth Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
multicellular organism development Hs biological process
axon guidance Hs biological process
central nervous system development Hs biological process
brain development Hs biological process
memory Hs biological process
locomotory behavior Hs biological process
dorsal/ventral pattern formation Hs biological process
regulation of gene expression Hs biological process
cerebellum development Hs biological process
central nervous system neuron differentiation Hs biological process
neuron differentiation Hs biological process
midbrain development Hs biological process
olfactory behavior Hs biological process
sequence-specific DNA binding Hs molecular function
negative regulation of neuron differentiation Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
synapse organization Hs biological process
dopaminergic neuron differentiation Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 128 5.31e-33
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 128 5.31e-33
transcription factor activity, RNA polymerase II core promoter sequence-specific Hs molecular function 128 5.31e-33
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 120 1.47e-30
DNA binding Hs molecular function 128 5.31e-33
transcription factor activity, sequence-specific DNA binding Hs molecular function 128 5.31e-33
transcription corepressor activity Hs molecular function 95.9 1.30e-21
protein binding Hs molecular function 128 5.31e-33
nucleus Hs cellular component 128 5.31e-33
macromolecular complex Hs cellular component 95.9 1.30e-21
sequence-specific DNA binding Hs molecular function 128 5.31e-33
metal ion binding Hs molecular function 128 5.31e-33

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding SMART molecular function 2.3E-21
regulation of transcription, DNA-templated ProSitePatterns biological process
sequence-specific DNA binding ProSitePatterns molecular function

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