Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

PRDM11; PRDM7; PRDM9

Species

H.aurantium

Unique Gene ID

Haaura.g00009896

Gene Model ID

Haaura.CG.MTP2014.S2804.g09896

Location

S2804:2813..8886

Transcript Models and Sequences

  Haaura.CG.MTP2014.S2804.g09896.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
SET_dom Pfam SET domain
SET_dom SMART SET domain
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
SET_dom ProSiteProfiles SET domain
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 178 3.91e-49
nucleic acid binding Hs molecular function 178 3.91e-49
protein binding Hs molecular function 178 3.91e-49
intracellular Hs cellular component 178 3.91e-49
nucleus Hs cellular component 178 3.91e-49
nucleoplasm Hs cellular component 175 4.30e-46
chromosome Hs cellular component 178 3.91e-49
cytoplasm Hs cellular component 118 2.43e-27
methyltransferase activity Hs molecular function 178 3.91e-49
transferase activity Hs molecular function 178 3.91e-49
histone-lysine N-methyltransferase activity Hs molecular function 178 3.91e-49
metal ion binding Hs molecular function 175 4.30e-46

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding ProSitePatterns molecular function
protein binding SMART molecular function 5.7E-8