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GENE CARD

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Gene Card

Best human hits

BRIX1; IMP4; RPF2

Species

H.aurantium

Unique Gene ID

Haaura.g00004090

Gene Model ID

Haaura.CG.MTP2014.S296.g04090

Location

S296:21609..23368

Transcript Models and Sequences

  Haaura.CG.MTP2014.S296.g04090.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
BRX1 PANTHER Ribosome biogenesis protein BRX1
Brix ProSiteProfiles Brix domain
Brix Pfam Brix domain
Brix SMART Brix domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

5 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal large subunit assembly Hs biological process
RNA binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
ribosome biogenesis Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
fibrillar center Hs cellular component 39.7 0.001
RNA binding Hs molecular function 346 5.78e-119
protein binding Hs molecular function 39.7 0.001
nucleus Hs cellular component 346 5.78e-119
nucleoplasm Hs cellular component 39.7 0.001
nucleolus Hs cellular component 346 5.78e-119
5S rRNA binding Hs molecular function 54.7 1.57e-08
rRNA binding Hs molecular function 54.7 1.57e-08
snoRNA binding Hs molecular function 39.7 0.001
intracellular ribonucleoprotein complex Hs cellular component 39.7 0.001
small-subunit processome Hs cellular component 39.7 0.001
Mpp10 complex Hs cellular component 39.7 0.001
rRNA primary transcript binding Hs molecular function 39.7 0.001

GO (InterProScan)

No result

GO Term Analysis Type e-value