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GENE CARD

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Gene Card

Best human hits

GPATCH3; TFIP11

Species

H.aurantium

Unique Gene ID

Haaura.g00004226

Gene Model ID

Haaura.CG.MTP2014.S312.g04226

Location

S312:50085..53742

Transcript Models and Sequences

  Haaura.CG.MTP2014.S312.g04226.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
G_patch_dom Pfam G-patch domain
G_patch_dom SMART G-patch domain
G_patch_dom ProSiteProfiles G-patch domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
negative regulation of type I interferon production Hs biological process
positive regulation of transcription, DNA-templated Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromosome, telomeric region Hs cellular component 40.4 0.003
nucleic acid binding Hs molecular function 348 1.18e-112
protein binding Hs molecular function 348 1.18e-112
proteinaceous extracellular matrix Hs cellular component 40.4 0.003
nucleus Hs cellular component 348 1.18e-112
nucleoplasm Hs cellular component 40.4 0.003
spliceosomal complex Hs cellular component 40.4 0.003
nucleolus Hs cellular component 40.4 0.003
cytoplasm Hs cellular component 348 1.18e-112
nuclear speck Hs cellular component 40.4 0.003
U2-type post-mRNA release spliceosomal complex Hs cellular component 40.4 0.003
catalytic step 2 spliceosome Hs cellular component 40.4 0.003

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 9.1E-6