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GENE CARD

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Gene Card

Best human hits

PRDM1; ZNF652; ZSCAN5B

Species

H.aurantium

Unique Gene ID

Haaura.g00010180

Gene Model ID

Haaura.CG.MTP2014.S3270.g10180

Location

S3270:1297..2834

Transcript Models and Sequences

  Haaura.CG.MTP2014.S3270.g10180.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 103 1.87e-26
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 104 4.73e-27
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 103 1.87e-26
nucleic acid binding Hs molecular function 104 4.73e-27
DNA binding Hs molecular function 104 4.73e-27
transcription factor activity, sequence-specific DNA binding Hs molecular function 104 4.73e-27
protein binding Hs molecular function 103 1.87e-26
nucleus Hs cellular component 104 4.73e-27
nucleoplasm Hs cellular component 103 1.87e-26
cytoplasm Hs cellular component 103 1.87e-26
methyltransferase activity Hs molecular function 103 1.87e-26
transferase activity Hs molecular function 103 1.87e-26
histone deacetylase binding Hs molecular function 103 1.87e-26
sequence-specific DNA binding Hs molecular function 103 1.87e-26
metal ion binding Hs molecular function 104 4.73e-27
promoter-specific chromatin binding Hs molecular function 103 1.87e-26

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.009