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Gene Card

Best human hits

KDM2A; KDM2B; PHF8

Species

H.aurantium

Unique Gene ID

Haaura.g00005315

Gene Model ID

Haaura.CG.MTP2014.S482.g05315

Location

S482:7906..13795

Transcript Models and Sequences

  Haaura.CG.MTP2014.S482.g05315.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
F-box_dom Pfam F-box domain
Leu-rich_rpt_Cys-con_subtyp SMART Leucine-rich repeat, cysteine-containing subtype
Znf_CXXC Pfam Zinc finger, CXXC-type
Znf_CXXC ProSiteProfiles Zinc finger, CXXC-type
JmjC_dom SMART JmjC domain
JmjC_dom ProSiteProfiles JmjC domain
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

38 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
DNA binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
double-strand break repair via nonhomologous end joining Hs biological process
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
spermatogenesis Hs biological process
methyltransferase activity Hs molecular function
zinc ion binding Hs molecular function
oxidoreductase activity Hs molecular function
rRNA binding Hs molecular function
midbrain-hindbrain boundary morphogenesis Hs biological process
fourth ventricle development Hs biological process
lateral ventricle development Hs biological process
third ventricle development Hs biological process
positive regulation of cell growth Hs biological process
forebrain development Hs biological process
midbrain development Hs biological process
hindbrain development Hs biological process
PcG protein complex Hs cellular component
methylation Hs biological process
histone demethylase activity Hs molecular function
histone H2A monoubiquitination Hs biological process
negative regulation of neuron apoptotic process Hs biological process
metal ion binding Hs molecular function
embryonic camera-type eye morphogenesis Hs biological process
dioxygenase activity Hs molecular function
histone demethylase activity (H3-K36 specific) Hs molecular function
oxidation-reduction process Hs biological process
histone H3-K36 demethylation Hs biological process
positive regulation of stem cell population maintenance Hs biological process
negative regulation of neural precursor cell proliferation Hs biological process

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 421 5.32e-129
DNA binding Hs molecular function 446 8.37e-140
chromatin binding Hs molecular function 291 1.32e-83
RNA binding Hs molecular function 421 5.32e-129
iron ion binding Hs molecular function 291 1.32e-83
protein binding Hs molecular function 446 8.37e-140
nucleus Hs cellular component 446 8.37e-140
nucleoplasm Hs cellular component 446 8.37e-140
nucleolus Hs cellular component 421 5.32e-129
methyltransferase activity Hs molecular function 446 8.37e-140
zinc ion binding Hs molecular function 446 8.37e-140
oxidoreductase activity Hs molecular function 446 8.37e-140
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Hs molecular function 291 1.32e-83
rRNA binding Hs molecular function 421 5.32e-129
PcG protein complex Hs cellular component 421 5.32e-129
nuclear membrane Hs cellular component 291 1.32e-83
histone demethylase activity Hs molecular function 446 8.37e-140
histone demethylase activity (H3-K9 specific) Hs molecular function 291 1.32e-83
methylated histone binding Hs molecular function 291 1.32e-83
histone demethylase activity (H4-K20 specific) Hs molecular function 291 1.32e-83
metal ion binding Hs molecular function 446 8.37e-140
dioxygenase activity Hs molecular function 446 8.37e-140
histone demethylase activity (H3-K36 specific) Hs molecular function 446 8.37e-140
histone demethylase activity (H3-K27 specific) Hs molecular function 291 1.32e-83

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding Pfam molecular function 1.7E-13
protein binding Pfam molecular function 2.0E-6
zinc ion binding Pfam molecular function 1.7E-13

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