Aniseed - Gene card

Gene Card

Best human hits

IMPACT; RWDD1

Species

H.aurantium

Unique Gene ID

Haaura.g00005399

Gene Model ID

Haaura.CG.MTP2014.S497.g05399

Location

S497:25747..26617

Transcript Models and Sequences

Haaura.CG.MTP2014.S497.g05399.01.t
Haaura.CG.MTP2014.S497.g05399.02.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
UBQ-conjugating_enzyme/RWD	SUPERFAMILY	Ubiquitin-conjugating enzyme/RWD-like
UBQ-conjugating_enzyme/RWD	Gene3D	Ubiquitin-conjugating enzyme/RWD-like
RWD-domain	Pfam	RWD domain
Impact	PANTHER	Impact family
RWD-domain	SMART	RWD domain
Impact_N	Pfam	Impact, N-terminal
UPF0029_Impact_CS	ProSitePatterns	Uncharacterised protein family UPF0029, Impact, conserved site
Ribosomal_S5_D2-typ_fold	SUPERFAMILY	Ribosomal protein S5 domain 2-type fold
RWD-domain	ProSiteProfiles	RWD domain
Impact_N_sf	Gene3D	Impact, N-terminal domain superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
negative regulation of protein phosphorylation	Hs	biological process
actin binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
polysome	Hs	cellular component
regulation of translation	Hs	biological process
regulation of translational initiation	Hs	biological process
nervous system development	Hs	biological process
cell differentiation	Hs	biological process
negative regulation of protein complex assembly	Hs	biological process
negative regulation of protein autophosphorylation	Hs	biological process
cellular response to amino acid starvation	Hs	biological process
cellular response to glucose starvation	Hs	biological process
ribosome binding	Hs	molecular function
positive regulation of neuron differentiation	Hs	biological process
negative regulation of cell death	Hs	biological process
regulation of eIF2 alpha phosphorylation by amino acid starvation	Hs	biological process
cellular response to hydrogen peroxide	Hs	biological process
positive regulation of translational initiation in response to starvation	Hs	biological process
cellular response to acidic pH	Hs	biological process
cellular response to UV-C	Hs	biological process
cellular response to benomyl	Hs	biological process
negative regulation of transcription from RNA polymerase II promoter in response to stress	Hs	biological process
neuron projection extension	Hs	biological process
cellular response to leucine starvation	Hs	biological process

GO (Blast)

5 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
actin binding	Hs	molecular function	257	4.43e-85
protein binding	Hs	molecular function	257	4.43e-85
cytoplasm	Hs	cellular component	257	4.43e-85
polysome	Hs	cellular component	257	4.43e-85
ribosome binding	Hs	molecular function	257	4.43e-85

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SMART	molecular function	4.4E-22