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Gene Card

Best human hits

NR1I2; NR1I3; VDR

Species

H.aurantium

Unique Gene ID

Haaura.g00001395

Gene Model ID

Haaura.CG.MTP2014.S57.g01395

Location

S57:83354..89796

Transcript Models and Sequences

  Haaura.CG.MTP2014.S57.g01395.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Znf_hrmn_rcpt ProSitePatterns Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt PRINTS Zinc finger, nuclear hormone receptor-type
Nucl_hrmn_rcpt_lig-bd SMART Nuclear hormone receptor, ligand-binding domain
Znf_NHR/GATA Gene3D Zinc finger, NHR/GATA-type
Nucl_hrmn_rcpt_lig-bd Pfam Nuclear hormone receptor, ligand-binding domain
NHR_like_dom_sf SUPERFAMILY Nuclear hormone receptor-like domain superfamily
Znf_hrmn_rcpt SMART Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt ProSiteProfiles Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt Pfam Zinc finger, nuclear hormone receptor-type
Nuclear_hrmn_rcpt PRINTS Nuclear hormone receptor

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

53 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
cell morphogenesis Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
skeletal system development Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
steroid hormone receptor activity Hs molecular function
transcription coactivator activity Hs molecular function
nuclear receptor activity Hs molecular function
androgen receptor activity Hs molecular function
thyroid hormone receptor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription initiation from RNA polymerase II promoter Hs biological process
xenobiotic metabolic process Hs biological process
calcium ion transport Hs biological process
cellular calcium ion homeostasis Hs biological process
signal transduction Hs biological process
multicellular organism development Hs biological process
drug binding Hs molecular function
steroid metabolic process Hs biological process
zinc ion binding Hs molecular function
negative regulation of cell proliferation Hs biological process
calcitriol receptor activity Hs molecular function
animal organ morphogenesis Hs biological process
positive regulation of gene expression Hs biological process
nuclear body Hs cellular component
androgen receptor signaling pathway Hs biological process
intracellular receptor signaling pathway Hs biological process
lithocholic acid receptor activity Hs molecular function
receptor complex Hs cellular component
steroid hormone mediated signaling pathway Hs biological process
sequence-specific DNA binding Hs molecular function
intermediate filament cytoskeleton Hs cellular component
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
retinoid X receptor binding Hs molecular function
intestinal absorption Hs biological process
vitamin D receptor signaling pathway Hs biological process
vitamin D response element binding Hs molecular function
RNA polymerase II transcription factor complex Hs cellular component
calcitriol binding Hs molecular function
lithocholic acid binding Hs molecular function

GO (Blast)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 125 9.74e-31
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 148 6.06e-39
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 125 9.74e-31
DNA binding Hs molecular function 148 6.06e-39
transcription factor activity, sequence-specific DNA binding Hs molecular function 148 6.06e-39
steroid hormone receptor activity Hs molecular function 148 6.06e-39
transcription coactivator activity Hs molecular function 125 9.74e-31
nuclear receptor activity Hs molecular function 148 6.06e-39
androgen receptor activity Hs molecular function 122 2.15e-30
thyroid hormone receptor activity Hs molecular function 125 9.74e-31
protein binding Hs molecular function 148 6.06e-39
nucleus Hs cellular component 148 6.06e-39
nucleoplasm Hs cellular component 148 6.06e-39
cytoplasm Hs cellular component 148 6.06e-39
cytosol Hs cellular component 122 2.15e-30
cytoskeleton Hs cellular component 122 2.15e-30
drug binding Hs molecular function 125 9.74e-31
zinc ion binding Hs molecular function 148 6.06e-39
calcitriol receptor activity Hs molecular function 148 6.06e-39
nuclear body Hs cellular component 125 9.74e-31
lithocholic acid receptor activity Hs molecular function 148 6.06e-39
receptor complex Hs cellular component 148 6.06e-39
sequence-specific DNA binding Hs molecular function 148 6.06e-39
intermediate filament cytoskeleton Hs cellular component 125 9.74e-31
metal ion binding Hs molecular function 148 6.06e-39
retinoid X receptor binding Hs molecular function 148 6.06e-39
vitamin D response element binding Hs molecular function 148 6.06e-39
RNA polymerase II transcription factor complex Hs cellular component 148 6.06e-39
calcitriol binding Hs molecular function 148 6.06e-39
lithocholic acid binding Hs molecular function 148 6.06e-39

GO (InterProScan)

8 results

GO Term Analysis Type e-value
DNA binding PRINTS molecular function 1.4E-16
transcription factor activity, sequence-specific DNA binding SMART molecular function 4.6E-32
steroid hormone receptor activity PRINTS molecular function 1.4E-16
nucleus SMART cellular component 4.6E-32
regulation of transcription, DNA-templated SMART biological process 1.4E-37
zinc ion binding SMART molecular function 4.6E-32
steroid hormone mediated signaling pathway SMART biological process 1.4E-37
sequence-specific DNA binding SMART molecular function 4.6E-32

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