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GENE CARD

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Gene Card

Best human hits

LDB3; PDLIM1; PDLIM3

Species

H.aurantium

Unique Gene ID

Haaura.g00001712

Gene Model ID

Haaura.CG.MTP2014.S78.g01712

Location

S78:45822..47682

Transcript Models and Sequences

  Haaura.CG.MTP2014.S78.g01712.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
PDZ Pfam PDZ domain
PDZ SMART PDZ domain
PDZ_sf SUPERFAMILY PDZ superfamily
PDZ ProSiteProfiles PDZ domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

41 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
response to hypoxia Hs biological process
transcription coactivator activity Hs molecular function
protein binding Hs molecular function
transcription factor complex Hs cellular component
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
cell-cell adherens junction Hs cellular component
focal adhesion Hs cellular component
regulation of transcription, DNA-templated Hs biological process
response to oxidative stress Hs biological process
actin filament organization Hs biological process
heart development Hs biological process
cytoskeletal protein binding Hs molecular function
structural constituent of muscle Hs molecular function
actin cytoskeleton Hs cellular component
Z disc Hs cellular component
cell projection Hs cellular component
metal ion binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
cell-cell adhesion Hs biological process
cadherin binding involved in cell-cell adhesion Hs molecular function
stress fiber Hs cellular component
nucleus Hs cellular component
endosome Hs cellular component
membrane Hs cellular component
protein phosphatase binding Hs molecular function
lamellipodium Hs cellular component
cell junction Hs cellular component
actin cytoskeleton reorganization Hs biological process
early endosome membrane Hs cellular component
early endosome lumen Hs cellular component
filamentous actin Hs cellular component
recycling endosome lumen Hs cellular component
protein homodimerization activity Hs molecular function
neuron projection Hs cellular component
dendritic spine Hs cellular component
synapse Hs cellular component
postsynaptic membrane Hs cellular component
alpha-actinin binding Hs molecular function
recycling endosome membrane Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transcription coactivator activity Hs molecular function 78.6 1.87e-16
protein kinase C binding Hs molecular function 72.4 4.54e-14
protein binding Hs molecular function 78.6 1.87e-16
transcription factor complex Hs cellular component 78.6 1.87e-16
cytoplasm Hs cellular component 78.6 1.87e-16
cytoskeleton Hs cellular component 78.6 1.87e-16
cell-cell adherens junction Hs cellular component 78.6 1.87e-16
focal adhesion Hs cellular component 78.6 1.87e-16
cytoskeletal protein binding Hs molecular function 73.9 8.41e-15
structural constituent of muscle Hs molecular function 73.9 8.41e-15
actin cytoskeleton Hs cellular component 73.9 8.41e-15
Z disc Hs cellular component 78.6 1.87e-16
pseudopodium Hs cellular component 72.4 4.54e-14
cell projection Hs cellular component 72.4 4.54e-14
metal ion binding Hs molecular function 78.6 1.87e-16
perinuclear region of cytoplasm Hs cellular component 72.4 4.54e-14
muscle alpha-actinin binding Hs molecular function 72.4 4.54e-14
cadherin binding involved in cell-cell adhesion Hs molecular function 78.6 1.87e-16

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 9.33E-20