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GENE CARD

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Gene Card

Best human hits

COL12A1; MATN2; SELE

Species

H.aurantium

Unique Gene ID

Haaura.g00006652

Gene Model ID

Haaura.CG.MTP2014.S786.g06652

Location

S786:777..6400

Transcript Models and Sequences

  Haaura.CG.MTP2014.S786.g06652.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

22 results

IPR Term Analysis Definition
VWF_A ProSiteProfiles von Willebrand factor, type A
EGF-like_CS ProSitePatterns EGF-like, conserved site
FN3_sf SUPERFAMILY Fibronectin type III superfamily
Sushi_SCR_CCP_dom ProSiteProfiles Sushi/SCR/CCP domain
Sushi_SCR_CCP_dom CDD Sushi/SCR/CCP domain
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain
EGF-like_dom ProSiteProfiles EGF-like domain
Sushi_SCR_CCP_dom Pfam Sushi/SCR/CCP domain
EGF-like_dom Pfam EGF-like domain
Sushi/SCR/CCP_sf SUPERFAMILY Sushi/SCR/CCP superfamily
Ig-like_fold Gene3D Immunoglobulin-like fold
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
EGF-type_Asp/Asn_hydroxyl_site ProSitePatterns EGF-type aspartate/asparagine hydroxylation site
FN3_dom CDD Fibronectin type III
EGF-like_dom SMART EGF-like domain
VWF_A Pfam von Willebrand factor, type A
VWF_A SMART von Willebrand factor, type A
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
CD59_antigen_CS ProSitePatterns CD59 antigen, conserved site
FN3_dom ProSiteProfiles Fibronectin type III
Sushi_SCR_CCP_dom SMART Sushi/SCR/CCP domain
EGF_Ca-bd_CS ProSitePatterns EGF-like calcium-binding, conserved site

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transmembrane signaling receptor activity Hs molecular function 110 7.48e-25
calcium ion binding Hs molecular function 97.8 1.30e-20
protein binding Hs molecular function 112 4.06e-25
extracellular region Hs cellular component 112 4.06e-25
proteinaceous extracellular matrix Hs cellular component 112 4.06e-25
collagen trimer Hs cellular component 112 4.06e-25
collagen type XII trimer Hs cellular component 112 4.06e-25
basement membrane Hs cellular component 97.8 1.30e-20
extracellular space Hs cellular component 112 4.06e-25
endoplasmic reticulum lumen Hs cellular component 112 4.06e-25
plasma membrane Hs cellular component 110 7.48e-25
integral component of plasma membrane Hs cellular component 110 7.48e-25
caveola Hs cellular component 110 7.48e-25
clathrin-coated pit Hs cellular component 110 7.48e-25
membrane Hs cellular component 110 7.48e-25
integral component of membrane Hs cellular component 110 7.48e-25
extracellular matrix structural constituent conferring tensile strength Hs molecular function 112 4.06e-25
carbohydrate binding Hs molecular function 110 7.48e-25
cortical cytoskeleton Hs cellular component 110 7.48e-25
extracellular matrix Hs cellular component 112 4.06e-25
sialic acid binding Hs molecular function 110 7.48e-25
phospholipase binding Hs molecular function 110 7.48e-25
membrane raft Hs cellular component 110 7.48e-25
metal ion binding Hs molecular function 110 7.48e-25
perinuclear region of cytoplasm Hs cellular component 110 7.48e-25
extracellular exosome Hs cellular component 112 4.06e-25
oligosaccharide binding Hs molecular function 110 7.48e-25
extracellular vesicle Hs cellular component 112 4.06e-25

GO (InterProScan)

2 results

GO Term Analysis Type e-value
calcium ion binding SMART molecular function 2.6E-8
protein binding SUPERFAMILY molecular function 2.42E-9