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GENE CARD

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Gene Card

Best human hits

TRIM54; TRIM55; TRIM63

Species

H.aurantium

Unique Gene ID

Haaura.g00006698

Gene Model ID

Haaura.CG.MTP2014.S796.g06698

Location

S796:6785..10831

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
Znf_B-box CDD B-box-type zinc finger
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_RING_CS ProSitePatterns Zinc finger, RING-type, conserved site
Bbox_C SMART B-box, C-terminal
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING SMART Zinc finger, RING-type
Znf-RING_LisH Pfam RING-type zinc-finger, LisH dimerisation motif
COS_domain ProSiteProfiles COS domain
Znf_B-box ProSiteProfiles B-box-type zinc finger
Znf_B-box Pfam B-box-type zinc finger
Znf_B-box SMART B-box-type zinc finger

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin-protein transferase activity Hs molecular function 305 4.94e-101
signal transducer activity Hs molecular function 320 3.53e-104
protein binding Hs molecular function 320 3.53e-104
intracellular Hs cellular component 320 3.53e-104
nucleus Hs cellular component 320 3.53e-104
cytoplasm Hs cellular component 320 3.53e-104
cytoskeleton Hs cellular component 301 1.56e-98
microtubule Hs cellular component 320 3.53e-104
microtubule associated complex Hs cellular component 301 1.56e-98
microtubule binding Hs molecular function 301 1.56e-98
zinc ion binding Hs molecular function 320 3.53e-104
transferase activity Hs molecular function 305 4.94e-101
Z disc Hs cellular component 305 4.94e-101
M band Hs cellular component 305 4.94e-101
titin binding Hs molecular function 305 4.94e-101
identical protein binding Hs molecular function 320 3.53e-104
contractile fiber Hs cellular component 305 4.94e-101
metal ion binding Hs molecular function 320 3.53e-104

GO (InterProScan)

2 results

GO Term Analysis Type e-value
intracellular SMART cellular component 6.2E-10
zinc ion binding Pfam molecular function 2.8E-7