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GENE CARD

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Gene Card

Best human hits

SALL1; SALL3

Species

H.aurantium

Unique Gene ID

Haaura.g00006988

Gene Model ID

Haaura.CG.MTP2014.S881.g06988

Location

S881:26042..31981

Transcript Models and Sequences

  Haaura.CG.MTP2014.S881.g06988.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
heterochromatin Hs cellular component 334 7.36e-95
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 334 7.36e-95
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 334 7.36e-95
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 334 7.36e-95
nucleic acid binding Hs molecular function 334 7.36e-95
DNA binding Hs molecular function 334 7.36e-95
transcription factor activity, sequence-specific DNA binding Hs molecular function 334 7.36e-95
histone deacetylase activity Hs molecular function 334 7.36e-95
protein binding Hs molecular function 334 7.36e-95
nucleus Hs cellular component 334 7.36e-95
nucleoplasm Hs cellular component 334 7.36e-95
cytoplasm Hs cellular component 334 7.36e-95
beta-catenin binding Hs molecular function 334 7.36e-95
chromocenter Hs cellular component 334 7.36e-95
NuRD complex Hs cellular component 334 7.36e-95
sequence-specific DNA binding Hs molecular function 334 7.36e-95
transcription regulatory region DNA binding Hs molecular function 334 7.36e-95
metal ion binding Hs molecular function 334 7.36e-95

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 1.2E-4