Aniseed - Gene card

Gene Card

Best human hits

HDAC4; HDAC7; HDAC9

Species

H.roretzi

Unique Gene ID

Harore.g00009007

Gene Model ID

Harore.CG.MTP2014.S106.g09007

Location

S106:230414..241218

Transcript Models and Sequences

Harore.CG.MTP2014.S106.g09007.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Ureohydrolase_dom_sf	SUPERFAMILY	Ureohydrolase domain superfamily
His_deacetylse	PANTHER	Histone deacetylase superfamily
His_deacetylse	PRINTS	Histone deacetylase superfamily
His_deacetylse_dom	Pfam	Histone deacetylase domain
His_deacetylse_dom_sf	Gene3D	Histone deacetylase domain superfamily

GOSlim

64 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
transcription corepressor activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
nervous system development	Orthology	biological process
heart development	Orthology	biological process
transcription factor binding	Orthology	molecular function
zinc ion binding	Orthology	molecular function
positive regulation of cell proliferation	Orthology	biological process
negative regulation of cell proliferation	Orthology	biological process
hydrolase activity	Orthology	molecular function
protein kinase binding	Orthology	molecular function
neuron differentiation	Orthology	biological process
identical protein binding	Orthology	molecular function
sequence-specific DNA binding	Orthology	molecular function
transcription regulatory region DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
Golgi apparatus	Orthology	cellular component
nuclear speck	Orthology	cellular component
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
system development	Orthology	biological process
blood vessel morphogenesis	Orthology	biological process
cell differentiation	Orthology	biological process
response to organic substance	Orthology	biological process
cell development	Orthology	biological process
organelle organization	Orthology	biological process
cellular protein modification process	Orthology	biological process
intracellular part	Orthology	cellular component
defense response	Orthology	biological process
cell projection assembly	Orthology	biological process
intracellular signal transduction	Orthology	biological process
protein modification by small protein conjugation	Orthology	biological process
ubiquitin-like protein transferase activity	Orthology	molecular function
cytoplasmic part	Orthology	cellular component
organelle part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
immune system process	Orthology	biological process
animal organ development	Orthology	biological process
synapse	Orthology	cellular component
cellular response to organic substance	Orthology	biological process
regulation of gene expression	Orthology	biological process
cellular process	Orthology	biological process
cytoskeletal part	Orthology	cellular component
enzyme binding	Orthology	molecular function
regulation of molecular function	Orthology	biological process
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
positive regulation of apoptotic process	Orthology	biological process
cell migration	Orthology	biological process
angiogenesis	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
anatomical structure development	Orthology	biological process
response to stimulus	Orthology	biological process
response to lipopolysaccharide	Orthology	biological process

GO (Orthology)

86 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
histone deacetylase complex	Hs	cellular component
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
core promoter binding	Hs	molecular function
RNA polymerase II transcription factor binding	Hs	molecular function
skeletal system development	Hs	biological process
vasculogenesis	Hs	biological process
response to amphetamine	Hs	biological process
osteoblast development	Hs	biological process
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription corepressor activity	Hs	molecular function
histone deacetylase activity	Hs	molecular function
protein kinase C binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor complex	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
chromatin organization	Hs	biological process
chromatin remodeling	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
protein deacetylation	Hs	biological process
inflammatory response	Hs	biological process
cell-cell junction assembly	Hs	biological process
nervous system development	Hs	biological process
heart development	Hs	biological process
transcription factor binding	Hs	molecular function
zinc ion binding	Hs	molecular function
positive regulation of cell proliferation	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
positive regulation of lamellipodium assembly	Hs	biological process
regulation of cardiac muscle contraction by calcium ion signaling	Hs	biological process
histone deacetylation	Hs	biological process
hydrolase activity	Hs	molecular function
protein sumoylation	Hs	biological process
transcriptional repressor complex	Hs	cellular component
SUMO transferase activity	Hs	molecular function
protein kinase binding	Hs	molecular function
sarcomere	Hs	cellular component
Z disc	Hs	cellular component
neuron differentiation	Hs	biological process
B cell differentiation	Hs	biological process
potassium ion binding	Hs	molecular function
neuromuscular junction	Hs	cellular component
A band	Hs	cellular component
NAD-dependent histone deacetylase activity (H3-K14 specific)	Hs	molecular function
cellular response to insulin stimulus	Hs	biological process
protein deacetylase activity	Hs	molecular function
activating transcription factor binding	Hs	molecular function
histone methyltransferase complex	Hs	cellular component
regulation of gene expression, epigenetic	Hs	biological process
B cell activation	Hs	biological process
response to drug	Hs	biological process
actomyosin	Hs	cellular component
identical protein binding	Hs	molecular function
histone deacetylase binding	Hs	molecular function
regulation of protein binding	Hs	biological process
negative regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
positive regulation of neuron apoptotic process	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
transcription regulatory region DNA binding	Hs	molecular function
negative regulation of osteoblast differentiation	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
regulation of skeletal muscle fiber development	Hs	biological process
positive regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
repressing transcription factor binding	Hs	molecular function
histone H3 deacetylation	Hs	biological process
cellular response to mechanical stimulus	Hs	biological process
cellular response to tumor necrosis factor	Hs	biological process
14-3-3 protein binding	Hs	molecular function
positive regulation of cell migration involved in sprouting angiogenesis	Hs	biological process
negative regulation of NIK/NF-kappaB signaling	Hs	biological process
negative regulation of pri-miRNA transcription from RNA polymerase II promoter	Hs	biological process
promoter-specific chromatin binding	Hs	molecular function
Golgi apparatus	Hs	cellular component
chromatin silencing	Hs	biological process
regulation of myotube differentiation	Hs	biological process
response to activity	Hs	biological process
nuclear speck	Hs	cellular component
response to cocaine	Hs	biological process
cellular response to lipopolysaccharide	Hs	biological process

GO (Blast)

38 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone deacetylase complex	Hs	cellular component	439	2.29e-135
core promoter binding	Hs	molecular function	439	2.29e-135
RNA polymerase II transcription factor binding	Hs	molecular function	439	2.29e-135
DNA binding	Hs	molecular function	439	2.29e-135
chromatin binding	Hs	molecular function	439	2.29e-135
transcription corepressor activity	Hs	molecular function	439	2.29e-135
histone deacetylase activity	Hs	molecular function	439	2.29e-135
protein kinase C binding	Hs	molecular function	409	1.24e-124
protein binding	Hs	molecular function	439	2.29e-135
nucleus	Hs	cellular component	439	2.29e-135
nucleoplasm	Hs	cellular component	439	2.29e-135
transcription factor complex	Hs	cellular component	405	1.02e-122
cytoplasm	Hs	cellular component	439	2.29e-135
cytosol	Hs	cellular component	439	2.29e-135
transcription factor binding	Hs	molecular function	439	2.29e-135
zinc ion binding	Hs	molecular function	439	2.29e-135
hydrolase activity	Hs	molecular function	439	2.29e-135
transcriptional repressor complex	Hs	cellular component	439	2.29e-135
SUMO transferase activity	Hs	molecular function	409	1.24e-124
protein kinase binding	Hs	molecular function	439	2.29e-135
sarcomere	Hs	cellular component	439	2.29e-135
Z disc	Hs	cellular component	439	2.29e-135
potassium ion binding	Hs	molecular function	439	2.29e-135
neuromuscular junction	Hs	cellular component	439	2.29e-135
A band	Hs	cellular component	439	2.29e-135
NAD-dependent histone deacetylase activity (H3-K14 specific)	Hs	molecular function	439	2.29e-135
protein deacetylase activity	Hs	molecular function	439	2.29e-135
activating transcription factor binding	Hs	molecular function	439	2.29e-135
histone methyltransferase complex	Hs	cellular component	405	1.02e-122
actomyosin	Hs	cellular component	439	2.29e-135
identical protein binding	Hs	molecular function	439	2.29e-135
histone deacetylase binding	Hs	molecular function	439	2.29e-135
sequence-specific DNA binding	Hs	molecular function	439	2.29e-135
transcription regulatory region DNA binding	Hs	molecular function	439	2.29e-135
metal ion binding	Hs	molecular function	439	2.29e-135
repressing transcription factor binding	Hs	molecular function	439	2.29e-135
14-3-3 protein binding	Hs	molecular function	409	1.24e-124
promoter-specific chromatin binding	Hs	molecular function	439	2.29e-135

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value