Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
Troponin	Pfam	Troponin
Troponin_sf	Gene3D	Troponin domain superfamily

GOSlim

27 results

GO Term	Annotation Origin	Type
actin binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
heart development	Orthology	biological process
protein kinase binding	Orthology	molecular function
positive regulation of transcription, DNA-templated	Orthology	biological process
metal ion binding	Orthology	molecular function
actin filament binding	Orthology	molecular function
blood vessel morphogenesis	Orthology	biological process
cell differentiation	Orthology	biological process
cytoplasmic part	Orthology	cellular component
cytoskeletal part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cellular process	Orthology	biological process
cell	Orthology	cellular component
intracellular signal transduction	Orthology	biological process
molecular function regulator	Orthology	molecular function
transmembrane transport	Orthology	biological process
metal ion transport	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
organelle part	Orthology	cellular component
cytoskeletal protein binding	Orthology	molecular function
nucleoside-triphosphatase activity	Orthology	molecular function
anatomical structure morphogenesis	Orthology	biological process
regulation of signaling	Orthology	biological process

GO (Orthology)

34 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
vasculogenesis	Hs	biological process
skeletal muscle contraction	Hs	biological process
actin binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
troponin complex	Hs	cellular component
cellular calcium ion homeostasis	Hs	biological process
regulation of muscle contraction	Hs	biological process
regulation of smooth muscle contraction	Hs	biological process
striated muscle contraction	Hs	biological process
regulation of striated muscle contraction	Hs	biological process
heart development	Hs	biological process
regulation of cardiac muscle contraction by calcium ion signaling	Hs	biological process
calcium channel inhibitor activity	Hs	molecular function
protein kinase binding	Hs	molecular function
protein domain specific binding	Hs	molecular function
myofibril	Hs	cellular component
sarcomere	Hs	cellular component
troponin C binding	Hs	molecular function
troponin T binding	Hs	molecular function
negative regulation of ATPase activity	Hs	biological process
contractile fiber	Hs	cellular component
positive regulation of transcription, DNA-templated	Hs	biological process
metal ion binding	Hs	molecular function
calcium-dependent protein binding	Hs	molecular function
actin filament binding	Hs	molecular function
ventricular cardiac muscle tissue morphogenesis	Hs	biological process
heart contraction	Hs	biological process
cardiac muscle contraction	Hs	biological process
cardiac myofibril	Hs	cellular component
regulation of cardiac conduction	Hs	biological process
cardiac Troponin complex	Hs	cellular component

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
actin binding	Hs	molecular function	131	1.03e-38
protein binding	Hs	molecular function	131	1.03e-38
nucleus	Hs	cellular component	131	1.03e-38
cytoplasm	Hs	cellular component	114	1.44e-31
cytosol	Hs	cellular component	131	1.03e-38
troponin complex	Hs	cellular component	131	1.03e-38
calcium channel inhibitor activity	Hs	molecular function	114	1.44e-31
protein kinase binding	Hs	molecular function	114	1.44e-31
protein domain specific binding	Hs	molecular function	114	1.44e-31
myofibril	Hs	cellular component	114	1.44e-31
sarcomere	Hs	cellular component	114	1.44e-31
troponin C binding	Hs	molecular function	114	1.44e-31
troponin T binding	Hs	molecular function	131	1.03e-38
contractile fiber	Hs	cellular component	114	1.44e-31
metal ion binding	Hs	molecular function	130	3.27e-38
calcium-dependent protein binding	Hs	molecular function	114	1.44e-31
actin filament binding	Hs	molecular function	114	1.44e-31
cardiac myofibril	Hs	cellular component	114	1.44e-31
cardiac Troponin complex	Hs	cellular component	114	1.44e-31

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
troponin complex	Pfam	cellular component	7.2E-22

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location