Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

G2E3; PHF6; PHF7

Species

H.roretzi

Unique Gene ID

Harore.g00008799

Gene Model ID

Harore.CG.MTP2014.S129.g08799

Location

S129:201841..203394

Transcript Models and Sequences

  Harore.CG.MTP2014.S129.g08799.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_PHD SMART Zinc finger, PHD-type
EPHD ProSiteProfiles Extended PHD (ePHD) domain
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_FYVE_PHD SUPERFAMILY Zinc finger, FYVE/PHD-type

GOSlim

24 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Blast biological process
DNA binding Blast molecular function
RNA binding Blast molecular function
ubiquitin-protein transferase activity Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
tubulin binding Blast molecular function
nuclear speck Orthology cellular component
transferase activity Blast molecular function
enzyme binding Blast molecular function
intracellular membrane-bounded organelle Blast cellular component
sequence-specific DNA binding Blast molecular function
metal ion binding Orthology molecular function
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
macromolecular complex binding Blast molecular function

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
nuclear speck Hs cellular component
metal ion binding Hs molecular function

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
chromosome, centromeric region Hs cellular component 68.2 2.18e-12
kinetochore Hs cellular component 68.2 2.18e-12
condensed chromosome kinetochore Hs cellular component 68.2 2.18e-12
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 68.2 2.18e-12
DNA binding Hs molecular function 68.2 2.18e-12
RNA binding Hs molecular function 68.2 2.18e-12
ubiquitin-protein transferase activity Hs molecular function 222 1.01e-64
protein binding Hs molecular function 222 1.01e-64
nucleus Hs cellular component 222 1.01e-64
nucleoplasm Hs cellular component 182 7.84e-53
chromosome Hs cellular component 68.2 2.18e-12
nucleolus Hs cellular component 222 1.01e-64
cytoplasm Hs cellular component 222 1.01e-64
Golgi apparatus Hs cellular component 182 7.84e-53
cytosol Hs cellular component 222 1.01e-64
plasma membrane Hs cellular component 182 7.84e-53
tubulin binding Hs molecular function 68.2 2.18e-12
nuclear speck Hs cellular component 182 7.84e-53
transferase activity Hs molecular function 222 1.01e-64
enzyme binding Hs molecular function 68.2 2.18e-12
histone binding Hs molecular function 68.2 2.18e-12
histone deacetylase binding Hs molecular function 68.2 2.18e-12
ribonucleoprotein complex binding Hs molecular function 68.2 2.18e-12
intracellular membrane-bounded organelle Hs cellular component 222 1.01e-64
sequence-specific DNA binding Hs molecular function 68.2 2.18e-12
metal ion binding Hs molecular function 222 1.01e-64
phosphoprotein binding Hs molecular function 68.2 2.18e-12
scaffold protein binding Hs molecular function 68.2 2.18e-12

GO (InterProScan)

No result

GO Term Analysis Type e-value