Aniseed - Gene card

Gene Card

Best human hits

CNBP; ZCCHC13; ZCCHC7

Species

H.roretzi

Unique Gene ID

Harore.g00013233

Gene Model ID

Harore.CG.MTP2014.S140.g13233

Location

S140:13938..16970

Transcript Models and Sequences

Harore.CG.MTP2014.S140.g13233.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_CCHC	ProSiteProfiles	Zinc finger, CCHC-type
Znf_CCHC_sf	SUPERFAMILY	Zinc finger, CCHC-type superfamily
Znf_CCHC	Pfam	Zinc finger, CCHC-type
Znf_CCHC	SMART	Zinc finger, CCHC-type

GOSlim

15 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Blast	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
cytosol	Orthology	cellular component
zinc ion binding	Orthology	molecular function
metal ion binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Blast	molecular function

GO (Orthology)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleolus	Hs	cellular component
cytosol	Hs	cellular component
zinc ion binding	Hs	molecular function
metal ion binding	Hs	molecular function

GO (Blast)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	42.4	2.33e-04
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	42.4	2.33e-04
nucleic acid binding	Hs	molecular function	119	4.27e-28
DNA binding	Hs	molecular function	42.4	2.33e-04
single-stranded DNA binding	Hs	molecular function	42.4	2.33e-04
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	42.4	2.33e-04
RNA binding	Hs	molecular function	119	4.27e-28
single-stranded RNA binding	Hs	molecular function	42.4	2.33e-04
protein binding	Hs	molecular function	119	4.27e-28
nucleus	Hs	cellular component	119	4.27e-28
nucleolus	Hs	cellular component	119	4.27e-28
cytoplasm	Hs	cellular component	42.4	2.33e-04
endoplasmic reticulum	Hs	cellular component	42.4	2.33e-04
cytosol	Hs	cellular component	119	4.27e-28
zinc ion binding	Hs	molecular function	119	4.27e-28
metal ion binding	Hs	molecular function	119	4.27e-28

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SUPERFAMILY	molecular function	2.33E-11
zinc ion binding	SUPERFAMILY	molecular function	2.33E-11